| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 203909 | NA (NA) | 15 (0.290) | 4/88 | NT | NA | noncoding (1314/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | Exported | = 203917 | NA (NA) | noncoding (1322/1542 nt) | rrsH | 16S ribosomal RNA | |||||
Only 100 of 123 total aligned reads displayed.
AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/203833‑203909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagtcGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCTC < Exported/203917‑203848 AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑T < 1:3048549/71‑1AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑T < 1:3041549/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCTGAT‑‑‑TG < 1:2811307/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:1029243/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:925749/1‑71 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:730988/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:3575019/1‑71 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:3216583/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:291333/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:2839627/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:1889007/1‑71 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:1716409/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:16736/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:1456164/1‑71 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:1198717/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:1092335/71‑1 TGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:2500543/1‑70 TGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:2743515/1‑70 TGGCGCATACAAAGAGAAGCGACATCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:3025582/1‑70 GGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:354480/1‑69 GGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:2065752/1‑69 GGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG > 1:1790754/1‑69 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAG < 1:475409/71‑1 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAG < 1:2179575/71‑1 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAG < 1:3594653/71‑1 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAG < 1:3359364/71‑1 CGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGT < 1:3688957/71‑1 CGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGT < 1:1029765/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC < 1:479465/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC > 1:1604390/1‑71 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC < 1:1376460/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC < 1:900371/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC < 1:3171046/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC > 1:1570095/1‑71 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC < 1:151759/71‑1 TACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑T < 1:1582777/62‑1 TACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑T < 1:3032413/62‑1 CAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGT > 1:3343179/1‑65 CAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGG > 1:1488429/1‑62 GAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:416251/71‑1 GACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGACTCCAA < 1:2703384/71‑1 CCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGA > 1:1262877/1‑50 CCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGA > 1:1512811/1‑50 CCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGA > 1:157075/1‑50 TCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:1073452/62‑1 CGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGA < 1:795643/47‑1 CGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGA < 1:2276698/47‑1 AGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGA < 1:1846136/71‑1 AGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGA < 1:1642586/71‑1 GCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAG > 1:3391668/1‑41 CAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TG < 1:1448856/37‑1 CGGACCTCATAAAGTGCGTCGCAGTCCGGAT‑‑‑TGGAGT < 1:918147/37‑1 GGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:3570327/48‑1 GGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:3446788/48‑1 GGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:3451054/48‑1 GGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:3474930/48‑1 GGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:194419/48‑1 GGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGT > 1:119590/1‑36 GGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGT > 1:1513836/1‑36 GACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTCGAGTTGCAGAC < 1:129110/47‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCt > 1:2265951/1‑70 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG > 1:513315/1‑71 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG < 1:1288532/71‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC < 1:712902/70‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC < 1:3716109/70‑1 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTt < 1:2695695/43‑2 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGCGGTC > 1:2889574/1‑69 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:617806/1‑71 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:265029/1‑71 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGA > 1:249546/1‑65 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGGCCGC < 1:1495264/53‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTGCGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT > 1:3339975/1‑71 GAGTCGAGTTGCAGACTCCAATCCGGACTACTACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC < 1:18964/68‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT < 1:117096/71‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC < 1:911048/70‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC < 1:2351805/70‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC < 1:1020531/68‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC < 1:2124442/68‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACCCACTTTATGAGGTCCGCTAGCTCTCGCGAGGTCGCT < 1:1242985/71‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACAACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT > 1:1866308/1‑71 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTT < 1:1460825/71‑1 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:3628856/1‑69 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:3633322/1‑69 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:1222345/1‑69 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTG > 1:3455012/1‑54 GTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGA > 1:399111/1‑62 GTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATG > 1:769604/1‑42 TCGAGTTGCAGACTCCAGTCCGGACTACGACGCACTTT < 1:2061913/38‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < 1:404703/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < 1:2683332/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < 1:2292088/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT > 1:1803168/1‑71 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGA > 1:1189735/1‑61 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGA > 1:3568259/1‑61 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTT < 1:2739074/38‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTT < 1:1664328/38‑1 CGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCTC > 1:1577205/1‑71 CGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGT > 1:16455/1‑63 CGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTC > 1:2652380/1‑56 CGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTC > 1:3645804/1‑56 AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGAT‑‑‑TGGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/203833‑203909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagtcGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCTC < Exported/203917‑203848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |