| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 203951 | NA (NA) | 12 (0.230) | 6/92 | NT | NA | noncoding (1356/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | Exported | = 203960 | NA (NA) | noncoding (1365/1542 nt) | rrsH | 16S ribosomal RNA | |||||
Only 100 of 153 total aligned reads displayed.
CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/203877‑203951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < Exported/203960‑203891 CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:1570535/1‑71CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:1336940/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:507349/1‑71CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:1601786/1‑71CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:1098419/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:2577108/71‑1CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:896556/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:2630732/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:1630277/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:692510/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:2817243/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:414560/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:1407003/1‑71 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:3436160/70‑1 CATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:3203668/70‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1347440/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:2830596/71‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:2160104/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:823581/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1105293/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1242400/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:823301/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:668336/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1170738/1‑71 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT > 1:3134076/1‑70 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT < 1:2635830/70‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:350804/69‑1 ATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:2701550/69‑1 TAAAGTGCGTCGTAGTCCGTATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:1030131/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:1309935/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:3297260/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:1821061/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG < 1:1831433/71‑1 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:2741389/1‑70 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:2169991/1‑70 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1041988/1‑70 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1833991/1‑70 TAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1265382/1‑70 AAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:906495/1‑66 TGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1497830/1‑65 TGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:1714964/1‑65 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG > 1:1517341/1‑62 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:2868453/61‑1 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:2814397/61‑1 TCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:3164886/59‑1 CGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC < 1:62128/57‑1 GTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTGATCCAC > 1:1085561/1‑70 TCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAACCGTGGCATTCTGATCCACGA < 1:2925591/71‑1 CCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAACCGTGGCATTCTGATCCACGA < 1:1264838/70‑1 TGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATC > 1:3307931/1‑45 GGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:3367493/1‑47 GGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG > 1:117215/1‑47 AGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:494471/45‑1 AGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:1549724/45‑1 AGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG < 1:445467/43‑1 TCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:3343772/43‑1 AACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGT < 1:3332385/37‑1 ACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTGATCCACGAT > 1:1624979/1‑54 ACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGCATTCTGATCCACGAT > 1:3614410/1‑54 CTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTG < 1:3652113/36‑1 CTCGACTCCATGAAGTCGGAATCGCTAGTAACCGTGGCATTCTGATCCACGATT > 1:1164504/1‑54 GAAGTCGGAATCGCTAGTAATCGTGGCATTCTGATCCACGA < 1:2223001/41‑1 GAAGTCGGAATCGCTAGTAATCGTGGCATTCTGATCCACGA < 1:385709/41‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:1442421/1‑71 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:1392053/1‑71 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:3725935/1‑71 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC < 1:942285/71‑1 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:796416/1‑71 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGAC > 1:2542865/1‑71 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGA > 1:2979247/1‑70 CGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAG < 1:1301157/46‑1 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACT < 1:2027674/71‑1 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGC > 1:221196/1‑54 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGA > 1:2805628/1‑49 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGA > 1:1148263/1‑49 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGA > 1:3557262/1‑49 GTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGA > 1:1922029/1‑49 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTA > 1:16490/1‑71 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTA > 1:1441298/1‑71 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTA < 1:2257331/71‑1 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTA > 1:1247223/1‑71 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTA > 1:2059632/1‑71 TGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTT < 1:1937057/51‑1 GGCATTCTGATCCACGATTACTAGCGATTCCGACTTGATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:32894/1‑71 GGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:2689767/1‑71 GGCATTCTGATCCACGATTAATAGCGATTCCGACTTCATGGAGTCGAGTT < 1:664202/50‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < 1:3475486/71‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < 1:3201/71‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < 1:3250231/71‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < 1:574115/71‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:1329733/1‑70 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC > 1:369453/1‑70 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC < 1:711401/70‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC < 1:810770/70‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTAC < 1:176562/70‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGA > 1:2122819/1‑46 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGA > 1:2118491/1‑46 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:1081595/44‑1 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:2342349/1‑43 GCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGA > 1:2433145/1‑41 CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/203877‑203951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCAATCCGGACTACG < Exported/203960‑203891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |