New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 206841 =NA (NA)14 (0.280) 6/88 NT NA noncoding (2258/2904 nt) rrlH 23S ribosomal RNA
?Exported 206866 = NA (NA)noncoding (2283/2904 nt) rrlH 23S ribosomal RNA

Only 100 of 141 total aligned reads displayed.

ATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/206917‑206841
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaggagCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGA  >  Exported/206866‑206935
                                                                                                                                                   
ATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              >  1:2362766/1‑71
ATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              >  1:680141/1‑71
ATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              >  1:541114/1‑71
ATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              >  1:3082226/1‑71
ATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              >  1:149649/1‑71
ATGCCATTGCACTAACCTCCTGATGTCCGACAAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              >  1:1398987/1‑71
 TGCCATTGCACTAACCTCCTTATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              <  1:1518542/70‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:1667618/71‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:749820/71‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:1625820/71‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:586484/71‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:1797357/71‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:1382744/71‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:3281120/71‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              <  1:1585248/70‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              >  1:2375416/1‑70
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              <  1:3122911/70‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              <  1:499213/70‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              <  1:1118134/70‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              <  1:1048263/70‑1
 TGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGCGCTCCTCCGTTACTCTTTAGG                                                                             <  1:2216406/71‑1
  GCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             <  1:2383997/70‑1
   CCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:2680903/1‑71
   CCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:1295533/1‑71
   CCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           <  1:169368/71‑1
    CATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGG                                                                          <  1:1856193/71‑1
    CATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGG                                                                          <  1:1982496/71‑1
    CATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGG                                                                          <  1:1000956/71‑1
    CATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGG                                                                          <  1:2905541/71‑1
    CATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:1021484/1‑70
     ATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGA                                                                         <  1:3306924/71‑1
     ATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGA                                                                         <  1:811665/71‑1
     ATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGA                                                                         <  1:2411409/71‑1
     ATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             >  1:1311283/1‑67
     ATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             >  1:3714681/1‑67
     ATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGG                                                                             >  1:1833080/1‑67
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAG                                                                        <  1:3421885/71‑1
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGA                                                                         <  1:2429749/70‑1
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGA                                                                         <  1:1199991/70‑1
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:1935657/1‑68
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:2307894/1‑68
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:1136147/1‑68
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:321434/1‑68
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:3664033/1‑68
      TTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTAGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:545729/1‑68
              ACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGA                                                                            <  1:3165856/59‑1
              ACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGA                                                                            <  1:81638/59‑1
                   CTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAG                                                                        >  1:624489/1‑58
                      ATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGA                                                                            >  1:2110460/1‑51
                       TGTCCGACCAGGATTAGCCACCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGA                                                                         >  1:259931/1‑53
                        GTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           >  1:2868916/1‑50
                             ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGA                                                                         <  1:162114/47‑1
                             ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           <  1:1546497/45‑1
                             ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAG                                                                           <  1:2928174/45‑1
                             ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAG                                                                              <  1:1231021/42‑1
                              CCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGG                                                                          <  1:619836/45‑1
                                   ATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAG                                                                        >  1:2461107/1‑42
                                   ATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAG                                                                        >  1:2512114/1‑42
                                                  TGCTCCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTA                                <  1:840297/67‑1
                                                   GCTCCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGT                                  <  1:278433/64‑1
                                                   GCTCCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGT                                  <  1:2370604/64‑1
                                                    CTCCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAA                          >  1:2715134/1‑71
                                                    CTCCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAA                          >  1:3631039/1‑71
                                                    CTCCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAA                          >  1:3193354/1‑71
                                                     TCCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAAT                         >  1:3641293/1‑71
                                                      CCTCCGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATG                        >  1:188683/1‑71
                                                          CGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCA                     >  1:1951862/1‑70
                                                          CGTTACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCA                     >  1:1326051/1‑70
                                                              ACTCTTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGT                                  <  1:2070067/53‑1
                                                                  TTTAGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCA              <  1:499869/69‑1
                                                                      GGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGA        <  1:3153602/71‑1
                                                                      GGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGA        >  1:1874781/1‑71
                                                                      GGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGA        <  1:1442438/71‑1
                                                                      GGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATA                   >  1:574777/1‑60
                                                                      GGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTG                             <  1:2284114/50‑1
                                                                      GGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTG                             <  1:3415209/50‑1
                                                                       GAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAA                          >  1:3268524/1‑52
                                                                       GAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCA                           <  1:3552049/51‑1
                                                                       GAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCA                           <  1:2352342/51‑1
                                                                       GAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGG                                      <  1:1344457/40‑1
                                                                        AGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACT      >  1:3137118/1‑71
                                                                        AGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACT      <  1:2241867/71‑1
                                                                        AGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATA                   >  1:3592838/1‑58
                                                                        AGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGG                                   >  1:743268/1‑42
                                                                         GGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTG     >  1:460705/1‑71
                                                                         GGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTG     <  1:894334/71‑1
                                                                         GGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTG     >  1:1603497/1‑71
                                                                         GGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTG     >  1:1541219/1‑71
                                                                         GGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTG     >  1:1402978/1‑71
                                                                         GGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGT                                  >  1:585723/1‑42
                                                                          GAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGC    <  1:2842149/71‑1
                                                                          GAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTT          <  1:1381352/65‑1
                                                                          GAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAA                          <  1:1874409/49‑1
                                                                          GAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAA                          <  1:2214724/49‑1
                                                                          GAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAA                          <  1:205464/49‑1
                                                                          GAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGC                            <  1:2538610/47‑1
                                                                           AGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCG   <  1:2455710/71‑1
                                                                           AGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCG   <  1:2117639/71‑1
                                                                            GCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGC    >  1:1508365/1‑69
                                                                            GCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGC    >  1:515105/1‑69
                                                                                                                                                   
ATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/206917‑206841
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaggagCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGA  >  Exported/206866‑206935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.