| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 206979 | NA (NA) | 10 (0.190) | 6/92 | NT | NA | noncoding (2396/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | Exported | = 207009 | NA (NA) | noncoding (2426/2904 nt) | rrlH | 23S ribosomal RNA | |||||
AGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/206905‑206979‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGTC < Exported/207009‑206940 AGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGA > 1:1042935/1‑71 GTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGAT > 1:1904164/1‑71 GTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGAT > 1:817340/1‑71 GTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGAT > 1:1381805/1‑71 TGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGAT < 1:1736261/70‑1 GCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCC > 1:3496184/1‑71 CAATGGCTTAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:3382794/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:1166508/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:3267216/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:2794609/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:2739191/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:3730464/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:2220078/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:2162922/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:436792/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:2043169/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:615814/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG < 1:1055436/71‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:161339/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG < 1:1176462/71‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG < 1:90216/71‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:853101/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:845925/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG < 1:1476426/71‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:1480763/1‑71 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCC < 1:3094246/70‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCC < 1:1664407/70‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCC < 1:2558593/70‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCC < 1:2424049/70‑1 CAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCC < 1:42707/70‑1 AATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG > 1:3218720/1‑70 TGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGA > 1:2642696/1‑64 ATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGAT < 1:1588020/61‑1 ATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGAT < 1:1516342/61‑1 CCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG < 1:668356/59‑1 AGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGA < 1:536525/53‑1 GCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCT > 1:924779/1‑71 AGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAA > 1:1116205/1‑71 AGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAA > 1:1665437/1‑71 ACGGCGCGAGCAGGTCCGAAAGCAGGTCATAGTGA < 1:3592785/35‑1 GCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGA < 1:2320507/70‑1 CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATC < 1:39518/71‑1 CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATC < 1:3696982/71‑1 CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATC < 1:1661221/71‑1 CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATC < 1:1766040/71‑1 CGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGAT < 1:2080289/68‑1 GAGCAGGTGCGAAAGCAGGTCATAGTGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACC < 1:2986130/63‑1 ATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGC > 1:3377097/1‑71 ATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGC > 1:2790234/1‑71 ATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCG < 1:2959975/70‑1 ATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCG < 1:2439451/70‑1 ATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGC < 1:889427/59‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCC < 1:3626972/71‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCC < 1:3186978/71‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCC < 1:1767363/71‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCG < 1:1387781/69‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCG < 1:3370193/69‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCG < 1:2280927/69‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTC < 1:1480664/66‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACT < 1:1597490/43‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACT < 1:3678258/43‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACT < 1:3159458/43‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACT < 1:2672757/43‑1 TCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACT < 1:812728/43‑1 CCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCC > 1:1756694/1‑70 CCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTC > 1:1678390/1‑55 CCGTTGAGCGATGGCCCTTCCATTCAGAACCACCG < 1:996263/35‑1 CCGTTGAGCGATGGCCCTTCCATTCAGAACCACCG < 1:3504862/35‑1 CCGTTGAGCGATGCCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG > 1:1476386/1‑71 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGCCCTGCTTTCGCAC > 1:1596300/1‑58 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT > 1:1009861/1‑71 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT < 1:107142/71‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT < 1:3613114/71‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT < 1:1135661/71‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT < 1:1139991/71‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT > 1:31874/1‑71 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT > 1:1666330/1‑71 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT > 1:2149484/1‑71 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT > 1:591624/1‑71 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG > 1:559255/1‑70 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:1437897/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:709016/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:1981737/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:487531/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:2149632/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:2317/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:3332632/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCG < 1:3548164/70‑1 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGC > 1:2022104/1‑66 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCAC > 1:1496735/1‑58 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCAC > 1:2690867/1‑58 CGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATCACCTGCTTTCGCACCTGCTCGCGCCGT < 1:3403885/71‑1 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGTC < 1:3638892/71‑1 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGT > 1:2333673/1‑70 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCG > 1:582680/1‑64 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGC < 1:3707298/49‑1 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGC < 1:858541/49‑1 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGC < 1:902722/49‑1 AGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/206905‑206979‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGTC < Exported/207009‑206940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |