New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 25791463 (1.070)7 (0.130) 3/92 NT 9.3% coding (1799/1848 nt) secD SecYEG protein translocase auxillary subunit
?Exported = 257928 80 (1.500)coding (1813/1848 nt) secD SecYEG protein translocase auxillary subunit

TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/257840‑257914
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG  <  Exported/257928‑257860
                                                                                                                                                
TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTG                                                                           >  1:2460948/1‑71
TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTG                                                                           >  1:844052/1‑71
TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTG                                                                           >  1:1916173/1‑71
  AAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC                                                                          >  1:174130/1‑70
         CGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAG                                                                   >  1:2655495/1‑70
         CGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAG                                                                   >  1:1236810/1‑70
         CGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAG                                                                   >  1:1450251/1‑70
           CGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC                                                                          <  1:392989/61‑1
           CGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC                                                                          <  1:3046378/61‑1
           CGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC                                                                          <  1:199050/61‑1
                        TATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCA                                                   <  1:1045986/71‑1
                          TCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCAC                                                  <  1:122381/70‑1
                          TCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCAC                                                  <  1:1133088/70‑1
                          TCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCAC                                                  <  1:3184601/70‑1
                            GGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC                                                                          <  1:2300323/44‑1
                                              TTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATG                                                      >  1:1794466/1‑46
                                              TTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATG                                                      >  1:2889109/1‑46
                                              TTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATG                                                      >  1:521157/1‑46
                                                                      GCCATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATAC     >  1:1797739/1‑71
                                                                      GCCATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATAC     >  1:3686590/1‑71
                                                                       CCATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACC    <  1:1026809/71‑1
                                                                        CATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCG   >  1:1098385/1‑71
                                                                         ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG  <  1:846243/71‑1
                                                                         ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG  <  1:911545/71‑1
                                                                         ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG  <  1:2122897/71‑1
                                                                         ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG  <  1:1800009/71‑1
                                                                         ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTA                              <  1:846369/43‑1
                                                                         ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTA                              <  1:1586136/43‑1
                                                                         ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGC                                  <  1:3414120/39‑1
                                                                                                                                                
TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/257840‑257914
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG  <  Exported/257928‑257860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.