| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 322303 = | 80 (1.360) | 8 (0.160) | 3/88 | NT | 12.6% | coding (1743/1932 nt) | dnaX | DNA polymerase III/DNA elongation factor III, tau and gamma subunits |
| ? | Exported | 322331 = | 42 (0.830) | coding (1771/1932 nt) | dnaX | DNA polymerase III/DNA elongation factor III, tau and gamma subunits | |||||
TATCGCCTGACGCCACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/322378‑322303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgaaGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACGAAGAAAAACTTGCG > Exported/322331‑322396 TATCGCCTGACGCCACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACC < 1:640669/70‑1TATCGCCTGACGCCACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACC < 1:2365763/70‑1 TCGCCTGACGCCACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTT < 1:2854604/71‑1 CGCCTGACGCCACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTT > 1:3132960/1‑70 CGCCTGACGCAACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTT > 1:1587623/1‑70 GCCTGACGCCACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTTGA < 1:1609748/71‑1 TACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCG < 1:2121511/45‑1 CGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTT > 1:2192076/1‑45 CGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTT > 1:2482142/1‑45 CAACGATAGTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGC > 1:1990129/1‑70 TAGTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCG < 1:1563096/40‑1 GTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCGTA > 1:3127362/1‑40 GTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCGTA > 1:167520/1‑40 GTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCGTA > 1:3454643/1‑40 GTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCGTA > 1:3477364/1‑40 GTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCGTA > 1:405600/1‑40 GTCAGTTCAACCGTTGAAGATGATAATCCCGCGGTGCGTA > 1:434349/1‑40 CGTTGAAGATGATAATCCCGCGGTTCGTACGCCGCTGGAGTGGCGTCAGGCGATATA > 1:3085882/1‑57 TTGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACG < 1:2844633/57‑1 TTGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCA < 1:328362/46‑1 TTGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCA < 1:857372/46‑1 TGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGG > 1:1941771/1‑40 TGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGG > 1:3448719/1‑40 TGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGG > 1:1119653/1‑40 GAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACGAAGAAAAACTTGCG > 1:2580800/1‑69 GAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACGAAGAAAAACTTGCG > 1:498879/1‑69 GAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACGAAGAAAAACTTGCG > 1:711220/1‑69 TATCGCCTGACGCCACTCCAGCGGCGTACGCACCGCGGGATTATCATCTTCAACGATAGTCAGTTCAACCGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/322378‑322303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgaaGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACGAAGAAAAACTTGCG > Exported/322331‑322396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |