New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 434316 | 58 (0.980) | 5 (0.090) | 3/98 | NT | 8.4% | coding (451/531 nt) | fldA | flavodoxin 1 |
? | Exported | = 434342 | 53 (0.940) | coding (425/531 nt) | fldA | flavodoxin 1 |
GAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/434273‑434316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTT < Exported/434342‑434274 GAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCTGGCTATCGACGAAGACCGTCAGCCGG < 1:2924743/71‑1 GAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCTGGCTATCGACGAAGACCGTCAGCCGG < 1:3585918/71‑1 TTAACCCATTTTTCTACACGTTCAGCGGTCAGTTCTGGCTATCGACGAAGACCGTCAGC < 1:2375928/59‑1 AACCCATTTTTCTACACGTTCAGCGGTCAGTTCTGGCTATCGACGAAGACCGTCAGCCG > 1:1174674/1‑59 AACCCATTTTTCTACACGTTCAGCGGTCAGTTCTGGCTATCGACGAAGACCGTCAGCCG > 1:206209/1‑59 TCTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTT < 1:1012305/71‑1 TCTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTT < 1:1460898/71‑1 TCTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTT < 1:269616/71‑1 TCTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTT < 1:557293/71‑1 TCTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTT < 1:973172/71‑1 GAAATCTGTTTAACCCATTTTTCTACACGTTCAGCGGTCAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/434273‑434316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTT < Exported/434342‑434274 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |