New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 449616 = | 53 (0.900) | 6 (0.110) | 3/96 | NT | 10.8% | coding (722/2049 nt) | kdpB | potassium translocating ATPase, subunit B |
? | Exported | 449637 = | 49 (0.880) | coding (701/2049 nt) | kdpB | potassium translocating ATPase, subunit B |
ACGAAATTGCCCTGACCATTCTGCTGATTGCCCTGACTATCGTCTTTTTACTGGCAACCGCCACGCTGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/449688‑449616 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGG > Exported/449637‑449678 ACGAAATTGCCCTGACCATTCTGCTGATTGCCCTGACTATCGTCTTTTTACTGGCAACCGCCACGCTGTGG < 1:1736118/71‑1 ACGAAATTGCCCTGACCATTCTGCTGATTGCCCTGACTATCGTCTTTTTACTGGCAACCGCCACGCTGTGG < 1:2114640/71‑1 TGGCAACCGCCACGCTGTGGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCA < 1:1821780/62‑1 TGGCAACCGCCACGCTGTGGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCA < 1:2967740/62‑1 GCAACCGCCACGCTGTGGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGG > 1:1113128/1‑62 AACCGCCACGCTGTGGCCAGTAAAAAGACGATAGTCAGGGC > 1:2394324/1‑41 AACCGCCACGCTGTGGCCAGTAAAAAGACGATAGTCAGGGC > 1:836112/1‑41 AACCGCCACGCTGTGGCCAGTAAAAAGACGATAGTCAGGG > 1:2383124/1‑40 ACGAAATTGCCCTGACCATTCTGCTGATTGCCCTGACTATCGTCTTTTTACTGGCAACCGCCACGCTGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/449688‑449616 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGG > Exported/449637‑449678 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |