| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 589625 | 23 (0.390) | 4 (0.080) | 3/88 | NT | 14.1% | coding (332/495 nt) | lrp | DNA‑binding transcriptional dual regulator, leucine‑binding |
| ? | Exported | = 589656 | 29 (0.570) | coding (363/495 nt) | lrp | DNA‑binding transcriptional dual regulator, leucine‑binding | |||||
CCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/589552‑589625‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatccggCACGCGTGTTTTCAACAGGTAGTCGAAATCACCGGATACTAAATGACACTCCTGAATTTCTTCAAGT < Exported/589656‑589590 CCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATC < 1:1149923/71‑1CCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATC > 1:2962721/1‑71 CGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCC > 1:653230/1‑71 GATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTAT < 1:568508/67‑1 GATGTGTTTGAACAATTCAATACCGATGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGG < 1:2620469/71‑1 ATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATC > 1:1672644/1‑67 GTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCC < 1:1290247/66‑1 TGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGT > 1:1510940/1‑57 AACTTGAAGAAATTCAGGAGTGTCATTTAGTATCC < 1:2530651/35‑1 AGAAATTCAGGAGTGTCATTTAGTATCCGGCACGCGTGTTTTCAACAGGTAGTCGAAATCACCGGATACTA < 1:2800021/71‑1 AGAAATTCAGGAGTGTCATTTAGTATCCGGCACGCGTGTTTTCAACAGGTAGTCGAAATCACCGGATACTA < 1:3003100/71‑1 GAGTGTCATTTAGTATCCGGCACGCTTGTTTTCAACAGG < 1:1595782/39‑1 GTGTCATTTAGTATCCGGCACGCGTGTTTTCAACAGGTA > 1:3361529/1‑39 CCGGCACGCGTGTTTTCAACAGGTAGTCGAAATCACCGGATACTAAATGACACTCCTGAATTTCTTCAAGT > 1:2326715/1‑71 CGGCACGCGTGTTTTCAACAGGTAGTCGAAATCACCGGATACTAAATGACACTCCTGAAT > 1:1433019/1‑60 CGGCACGCGTGTTTTCAACAGGTAGTCGAAATCACCGGATACTAAATGACACTCCTGAAT > 1:3236774/1‑60 CCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/589552‑589625‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatccggCACGCGTGTTTTCAACAGGTAGTCGAAATCACCGGATACTAAATGACACTCCTGAATTTCTTCAAGT < Exported/589656‑589590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |