| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 704051 = | 36 (0.610) | 5 (0.100) | 3/90 | NT | 13.0% | coding (594/2097 nt) | ymcA | conserved hypothetical protein |
| ? | Exported | 704072 = | 35 (0.670) | coding (573/2097 nt) | ymcA | conserved hypothetical protein | |||||
CGATAAATATTGTCATCGCGCAGAGTCTCACGATGCGGGCGATATCAGCTTTAGCGATATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/704111‑704051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatcGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCGGCAAAACGGGTTGGTAATAT > Exported/704072‑704139 CGATAAATATTGTCATCGCGCAGAGTCTCACGATGCGGGCGATATCAGCTTTAGCGAT > 1:2222964/1‑58 GCGATATCAGCTTTAGCGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCT < 1:136506/65‑1 ATATCAGCTTTAGCGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCGGC > 1:2506099/1‑70 TATCAGCTTTAGCGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCT > 1:3115586/1‑61 TATCAGCTTTAGCGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCT > 1:682518/1‑61 TATCAGCTTTAGCGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGC > 1:3086294/1‑60 GATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCGGCAAAACGGGTTGGTAA > 1:3673975/1‑71 TATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCGGCAAAACGGGTTGGTAATA < 1:686592/71‑1 ATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCGGCAAAACGGGTTGGTAATAT > 1:2369003/1‑71 TCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCGGCAAAACGGGTTGGT < 1:200237/65‑1 CGATAAATATTGTCATCGCGCAGAGTCTCACGATGCGGGCGATATCAGCTTTAGCGATATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/704111‑704051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatcGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCGGCAAAACGGGTTGGTAATAT > Exported/704072‑704139 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |