| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 759738 = | 48 (0.810) | 4 (0.080) | 3/90 | NT | 9.0% | coding (785/789 nt) | ycfZ | predicted inner membrane protein |
| ? | Exported | 759772 = | 39 (0.750) | coding (751/789 nt) | ycfZ | predicted inner membrane protein | |||||
AGAATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/759811‑759738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaacgTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTATTATCGATATACA > Exported/759772‑759840 AGAATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTA > 1:3696292/1‑70 GAATATCGCCACTCTGGGCATGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAA < 1:1181994/70‑1 GAATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAA > 1:633004/1‑71 ATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAAC > 1:1042278/1‑70 AGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGT > 1:1815062/1‑49 GTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAAC < 1:2641644/42‑1 TACGTTTATTGCCGCATTGTTATTGACGAGTAAACGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGA > 1:2456245/1‑70 TACGTTTATTGCCGCATTGTTATTGACGAGTAAACGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGA > 1:1467032/1‑70 CGTTTATTGCCGCATTGTTATTGACGAGTAAACGTACAGACACCAATTAGCCCTGCCCAGAGT < 1:2649968/63‑1 TTTATTGCCGCATTGTTATTGACGAGTAAACGTACAGACACCAATTAGCCCTGCCCAGAGTGG > 1:1398641/1‑63 TAAACGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTTGTAATCGCAAAGCTATTATCGATA < 1:2190900/71‑1 TAAACGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTAT > 1:2068218/1‑63 AACGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTATTATCGATATA > 1:2649479/1‑71 CGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTATTATCGATATACA < 1:2178407/71‑1 CGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTATTATCGATATACA < 1:375968/71‑1 CGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTATTATCGATATACA < 1:902465/71‑1 CGTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCT < 1:2834188/42‑1 GTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTATTATCGATATACA > 1:742242/1‑70 GTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTA > 1:2296120/1‑45 AGAATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/759811‑759738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaacgTACAGACACCAATTAGCCCTGCCCAGAGTGGCGATATTCTGGTAATCGCAAAGCTATTATCGATATACA > Exported/759772‑759840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |