| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 969609 | 52 (0.880) | 3 (0.060) | 3/84 | NT | 6.4% | intergenic (‑193/‑56) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily |
| ? | Exported | = 969624 | 45 (0.930) | intergenic (‑208/‑41) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily | |||||
TGAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/969534‑969609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacaaatGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGATCAC < Exported/969624‑969557 TGAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:452774/1‑71 GAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:1348939/1‑70 GAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:3571388/1‑70 AAAATCAAAATAGCATAAATTTTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAAC > 1:223921/1‑70 AAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACA < 1:2798446/71‑1 GTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTAT > 1:1115924/1‑45 GTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTAT > 1:343063/1‑45 GTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTAT > 1:2915500/1‑45 GTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTAT > 1:2608198/1‑45 GTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTAT > 1:3547187/1‑45 GTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTAT > 1:163627/1‑45 GTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTAT > 1:1551239/1‑45 TTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACA < 1:2086116/42‑1 GTGCAATGTCCACCTAAGGTTATGAACAAATGTATTTCTGCT < 1:1248222/42‑1 GTCCACCTAAGGTTATGAACAAATGTATTTCTGCTT < 1:3295586/36‑1 CCACCTAAGGTTATGAACAAATGTATTTCTGCTTTT > 1:3040116/1‑36 TGAACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAA > 1:2279742/1‑69 TGAACAAATGTATTTCTGCTTTTAATTTGTTCATAA > 1:667206/1‑36 GAACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAA > 1:434334/1‑68 AACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAA > 1:1153639/1‑67 AACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGG > 1:3059929/1‑41 ACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCAC < 1:1187161/52‑1 CAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGAT > 1:613090/1‑70 AAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTT > 1:2202611/1‑56 AAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTT > 1:1847175/1‑56 AATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGATCAC < 1:3651756/71‑1 ATGTATTTATGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGATCAC > 1:3330375/1‑70 TGAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/969534‑969609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacaaatGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGATCAC < Exported/969624‑969557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |