| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 975564 | 102 (1.730) | 6 (0.110) | 4/96 | NT | 5.6% | coding (51/375 nt) | ydeH | conserved hypothetical protein |
| ? | Exported | = 975584 | 108 (1.950) | coding (31/375 nt) | ydeH | conserved hypothetical protein | |||||
GGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/975493‑975564‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACAGCGTGG < Exported/975584‑975515 GGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGC > 1:1401148/1‑71GGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGC > 1:1416970/1‑71 GCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCC < 1:2774129/71‑1 GCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAG < 1:1251727/69‑1 TGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAG > 1:613815/1‑63 GCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCATCTTGTTAAATCTCAA > 1:1276030/1‑71 ACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCATCTTGTTAAATCTCAATAA < 1:1484895/71‑1 ACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCATCTTGTTAAATCTCAATAA < 1:1083302/71‑1 ACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCATCTTGTTAAATCTCAATAA < 1:3397770/58‑1 ATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCATCTTGTTAAATCTCAATAAGG > 1:2083234/1‑58 ACTGGTAGTGGGCATCGATAGCCATCTTGTTAAATCTCAATAAG > 1:1870227/1‑44 GCCATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACAGCGT > 1:3088100/1‑71 GCCATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACA < 1:2724174/67‑1 GCCATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACA < 1:819534/67‑1 GCCATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACA < 1:3631248/67‑1 GCCATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACA < 1:2753776/67‑1 CATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACAGCGTGG < 1:883828/71‑1 CATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCA < 1:1333366/42‑1 GGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/975493‑975564‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACAGCGTGG < Exported/975584‑975515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |