| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1056693 = | 70 (1.190) | 6 (0.120) | 3/84 | NT | 9.5% | intergenic (+8/‑85) | rnt/lhr | ribonuclease T (RNase T)/predicted ATP‑dependent helicase |
| ? | Exported | 1056725 = | 57 (1.170) | intergenic (+40/‑53) | rnt/lhr | ribonuclease T (RNase T)/predicted ATP‑dependent helicase | |||||
TTCCCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1056769‑1056693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggcatcTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATAATC > Exported/1056725‑1056790 TTCCCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATC < 1:1268118/70‑1TTCCCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATC < 1:1434131/70‑1 CCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGC < 1:3049391/71‑1 CCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGG > 1:2708650/1‑70 CCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGG > 1:1854638/1‑70 CCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGG > 1:3070637/1‑70 CCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGCA < 1:939851/71‑1 CCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGCA < 1:3069982/71‑1 CCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGCA < 1:449246/71‑1 GTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGCATC > 1:424678/1‑71 GTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGCATC > 1:2613176/1‑71 TCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCA > 1:2013032/1‑58 TCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCA > 1:3299598/1‑58 AGCCTCACTATAGATGCCTGAATCATTGCATGTCAT < 1:2405611/36‑1 CACTATAGATGCCTGAATCATTGCATGTCATCAGGC > 1:3636424/1‑36 CTGAATCATTGCATGTCATCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGC < 1:345669/55‑1 CTGAATCATTGCATGTCATCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGC < 1:723978/55‑1 ATCATTGCATGTCATCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATA > 1:306472/1‑57 ATCATTGCATGTCATCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATA > 1:1119510/1‑57 ATCATTGCATGTCATCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCAT < 1:2821350/53‑1 ATCATTGCATGTCATCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCAT < 1:1981691/53‑1 CAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGAT < 1:1966402/70‑1 CAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGAT < 1:1616162/70‑1 CAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGAT < 1:634943/70‑1 AGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATA < 1:2393432/70‑1 AGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATA < 1:210365/70‑1 AGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATA < 1:1205803/70‑1 AGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATA < 1:994987/70‑1 GGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATA < 1:2389094/69‑1 GCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATAATC > 1:3091162/1‑71 ATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATAAT < 1:1885485/68‑1 ATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATAAT < 1:1080134/68‑1 TTCCCCGTGAATATCATGCAGGATGCGTGGAATAGCCTCACTATAGATGCCTGAATCATTGCATGTCATCAGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1056769‑1056693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggcatcTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATAGCGTTAATGGCAGATAATC > Exported/1056725‑1056790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |