| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1102207 | 105 (1.780) | 7 (0.130) | 5/92 | NT | 6.3% | coding (728/867 nt) | ydiB | quinate/shikimate 5‑dehydrogenase, NAD(P)‑binding |
| ? | Exported | = 1102226 | 113 (2.120) | coding (747/867 nt) | ydiB | quinate/shikimate 5‑dehydrogenase, NAD(P)‑binding | |||||
ATATCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1102135‑1102207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcaACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGACCAGAAGT < Exported/1102226‑1102157 ATATCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTG > 1:3349367/1‑71 TATCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGC < 1:1569343/71‑1 TATCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGC < 1:2814322/71‑1 TGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTG > 1:447845/1‑62 TGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTG > 1:2448009/1‑62 GGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAACCAGCTTGTTGCGCCTG > 1:196398/1‑71 ACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAACCAGCTTGTTGCGCCTGCT < 1:516643/71‑1 ACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAACCAGCTTGTTGCGCCTGCT < 1:1964433/71‑1 CTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAACCAGCTTGTTGCGCCTGCTGCAA > 1:1625977/1‑71 GTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAACCAGCTTGTTGCGCCTGCTGCAA < 1:294273/68‑1 TGACGAAGTTATTGCAACCAGCTTGTTGCGCCTGCT > 1:969059/1‑36 TGACGAAGTTATTGCAACCAGCTTGTTGCGCCTGCT > 1:2865128/1‑36 TTGCAACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGAC > 1:228338/1‑68 TTGCAACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGAC > 1:403530/1‑68 TTGCAACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGAC > 1:1165351/1‑68 TGCAACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGAGCAG < 1:2812856/70‑1 TGCAACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGACCAG < 1:154421/70‑1 GCAACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACA > 1:1085801/1‑53 AACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGACCAGAAGT > 1:217537/1‑71 ATATCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1102135‑1102207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcaACCAGCTTGTTGCGCCTGCTGCAATAACTTCGTCATATGCGGGTTATACACGCATTCAGTGACCAGAAGT < Exported/1102226‑1102157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |