| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1228464 = | 37 (0.630) | 3 (0.060) | 3/88 | NT | 5.9% | coding (44/873 nt) | yebZ | predicted inner membrane protein |
| ? | Exported | 1228520 = | 63 (1.240) | coding (366/375 nt) | yobA | conserved hypothetical protein | |||||
AAGGACACTACACCTTTAGCGTGAAATAAATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1228539‑1228464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttcacGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAG > Exported/1228520‑1228586 AAGGACACTACACCTTTAGCGTGAAATAAATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCAT < 1:3630123/71‑1 GACACTACACCTTTAGCGTGAAATAAATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTC < 1:2802751/71‑1 GACACTACACCTTTAGCGTGAAATAAATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTT > 1:324789/1‑70 CACTACACCTTTAGCGTGAAATAAATCATGCTGGCGTTTACCTGGATCGCGATGCGATTTATCCATTTCAC > 1:1955758/1‑71 TGAAATAAATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCAT < 1:416940/50‑1 ATAAATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCACGCTAAAGGTGTAGTGTCCTT > 1:2160831/1‑71 TGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGC > 1:2634050/1‑71 CGCTGCGATTTATCCATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACA < 1:1328168/71‑1 TCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGA < 1:1330083/46‑1 TCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGA < 1:1808495/46‑1 CACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAG > 1:1941280/1‑70 CACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCC < 1:3466563/40‑1 ACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAA > 1:1035184/1‑46 ACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAA > 1:2219457/1‑46 CGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAA < 1:1738434/48‑1 CGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAA < 1:1917564/48‑1 AAGGACACTACACCTTTAGCGTGAAATAAATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1228539‑1228464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttcacGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAG > Exported/1228520‑1228586 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |