| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1270365 = | 71 (1.200) | 4 (0.080) | 3/90 | NT | 6.3% | coding (616/816 nt) | yedP | conserved hypothetical protein |
| ? | Exported | 1270390 = | 57 (1.100) | coding (641/816 nt) | yedP | conserved hypothetical protein | |||||
CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1270440‑1270365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGT > Exported/1270390‑1270457 CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTT < 1:1452105/71‑1CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTT < 1:1497418/71‑1CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTT < 1:35221/71‑1CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTT < 1:1956787/71‑1CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTT < 1:2340096/71‑1CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTT < 1:2601488/71‑1 ATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTTGG < 1:3330989/71‑1 TCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTTGGG > 1:1613466/1‑71 ACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTTGGGCG < 1:2118582/71‑1 CTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTTGG > 1:136593/1‑51 CCATCGCCCAGGCCAAGTGTGGTTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACG > 1:1161779/1‑71 CCCAGGCCAAGTGTGGTTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATG < 1:1736928/58‑1 CAGGCCAAGTGTGGTTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGA > 1:3232169/1‑58 CAGGCAAAGTGTGGTTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGG > 1:3305873/1‑57 TGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAAT > 1:1362169/1‑71 GGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATC > 1:1776018/1‑70 GGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTA > 1:2527257/1‑44 GGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTA > 1:2377858/1‑44 GGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTA > 1:752449/1‑44 GGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATT > 1:533088/1‑43 GCGATGGTCCAAACGATGCGCCCTTACTGGAGGTAA < 1:1701925/36‑1 GCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGT < 1:2630340/71‑1 GCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGT < 1:3722688/71‑1 CAATCACCGCGTAATCCATTACCTCCAGTAAGGGCGCATCGTTTGGCCCATCGCCCAGGCCAAGTGTGGTTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1270440‑1270365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGT > Exported/1270390‑1270457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |