| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1352904 = | 103 (1.750) | 10 (0.190) | 3/92 | NT | 9.3% | coding (609/789 nt) | thiM | hydoxyethylthiazole kinase |
| ? | Exported | 1352939 = | 102 (1.920) | coding (574/789 nt) | thiM | hydoxyethylthiazole kinase | |||||
ATGGACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1352977‑1352904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattaACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATCTCGCCAGTGACC > Exported/1352939‑1353006 ATGGACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCA > 1:3158433/1‑71 TGGACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCAT > 1:1000234/1‑71 GACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGTCTGTGCATT < 1:552224/70‑1 GACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATTA < 1:110118/71‑1 GACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATTA < 1:1919137/71‑1 GACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATT < 1:2980551/70‑1 GACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATT < 1:3225992/70‑1 GACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATT < 1:2412380/70‑1 GACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATT < 1:2618404/70‑1 TGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCAT > 1:422617/1‑56 GTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATT < 1:1712323/46‑1 CCGTTACTGACCAAAGTGGTAGGAACTGGCTGTGCA > 1:488/1‑36 CCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCA > 1:3730173/1‑36 AATGACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGA < 1:3052940/61‑1 AATGACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGA < 1:576429/61‑1 AATGACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGA < 1:1298596/61‑1 AATGACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGA < 1:2196113/61‑1 AATGACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGA < 1:2555288/61‑1 AATGACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGGGAATACCAATGA < 1:2935355/61‑1 ACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCG < 1:1629688/71‑1 ACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCG < 1:2390758/71‑1 ACCAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCG < 1:584669/71‑1 CAAAGTGGTAGGAACTGGCTGTGCATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGG > 1:3427701/1‑70 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATCTCGCCAGTGA > 1:2403667/1‑71 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATC < 1:936749/61‑1 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATC < 1:984031/61‑1 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATC < 1:321407/61‑1 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATC < 1:2286358/61‑1 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATC < 1:1891075/61‑1 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATC < 1:181190/61‑1 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATC < 1:1572708/61‑1 CATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAACCCATC < 1:2667943/61‑1 ATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATCTCGCCAGTGAC > 1:3392552/1‑71 ATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATCTCGCCAGTGAC > 1:18058/1‑71 ATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATCTCGCCAGTGAC > 1:1770151/1‑71 ATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATC > 1:3229219/1‑44 ATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATC > 1:3378836/1‑44 ATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATC > 1:121575/1‑44 ATTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATC > 1:1175134/1‑44 TTAACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATCTCGCCAGTGACC < 1:2669818/71‑1 ATGGACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1352977‑1352904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattaACGGATCACCACCGTGAATACCAATGATACGATGTCCATCGGTAACATAATCCATCTCGCCAGTGACC > Exported/1352939‑1353006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |