New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 1405274 = | 52 (0.880) | 4 (0.080) | 3/88 | NT | 9.4% | coding (1479/1815 nt) | yejA | predicted oligopeptide transporter subunit |
? | Exported | 1405305 = | 32 (0.630) | coding (1510/1815 nt) | yejA | predicted oligopeptide transporter subunit |
GGGCTTTGCACGCCGGGGGCATTATAAGTGGAATTGATATATTCCGATGACCAGGAAATCTGTAAATCGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1405345‑1405274 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggaaTATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAACCAAAT > Exported/1405305‑1405372 GGGCTTTGCACGCCGGGGGCATTATAAGTGGAATTGATATATTCCGATGACCAGGAAATCTGTAAATCGG > 1:350176/1‑70 GGGGCATTATAAGTGGAATTGATATATTCCGATGACCAGGAAATCTGTAAATCGGAA > 1:3410431/1‑57 ATTATAAGTGGAATTGATATATTCCGATGACCAGGAAATCTGTAAATCGGA < 1:1625025/51‑1 GTGGAATTGATATATTCCGATGACCAGGAAATCTGTAAAT > 1:3097147/1‑40 TCCGATGACCAGGAAATCTGTAAATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGCCC > 1:3371115/1‑71 CCGATGACCAGGAAATCTGTAAATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGCCCG > 1:807715/1‑71 CCGATGACCAGGAAATCTGTAAATCGGAATATATCAATTCCACTTATAATGCCCCCG < 1:2213048/57‑1 CCGATGACCAGGAAATCTGTAAATCGGAATATATCAATTCCACTTATAATGCCCCCG < 1:3233573/57‑1 ATCGGAATATATCAATTCCACTTATATTGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAAC < 1:82824/70‑1 AATATATCAATTCCACTTATAATGCCCGCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAACCAAAT < 1:2670596/70‑1 GGGCTTTGCACGCCGGGGGCATTATAAGTGGAATTGATATATTCCGATGACCAGGAAATCTGTAAATCGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1405345‑1405274 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggaaTATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAACCAAAT > Exported/1405305‑1405372 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |