| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1852566 | 53 (0.900) | 7 (0.140) | 3/86 | NT | 14.2% | coding (1055/1509 nt) | ygcL | hypothetical protein |
| ? | Exported | = 1852580 | 40 (0.800) | coding (1041/1509 nt) | ygcL | hypothetical protein | |||||
CACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1852490‑1852566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgattatGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAATCAGGG < Exported/1852580‑1852512 CACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTT > 1:2160893/1‑71 CATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGA > 1:110375/1‑71 CATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGA > 1:660189/1‑71 CATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGA > 1:62956/1‑71 CATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGA > 1:555275/1‑71 CATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGA > 1:3685232/1‑71 GCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT > 1:3162904/1‑71 CCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT < 1:249521/70‑1 CCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT < 1:3345907/70‑1 TATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGGTTGATTAT < 1:1133210/67‑1 TATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT < 1:1048448/67‑1 TATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT < 1:2253024/67‑1 GTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT < 1:237073/63‑1 CCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTA > 1:3038592/1‑53 CCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTA > 1:3575098/1‑53 AAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTA > 1:3365514/1‑46 AAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTA > 1:924677/1‑46 CAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATGGGGGGATATCGTAATAATC < 1:1992182/61‑1 TCATGACGCCGTTCAAGAATAGATGCTTGATTATGGGGGGATATCGTAATAAT < 1:2393569/53‑1 AAGAATAGATGCTTGATTATGGGGGGATATCGTAATAA < 1:2818211/38‑1 AAGAATAGATGCTTGATTATGGGGGGATATCGTAATAA < 1:3087170/38‑1 AAGAATAGATGCTTGATTATGGGGGGATATCGTAATAA < 1:3304269/38‑1 AAGAATAGATGCTTGATTATGGGGGGATATCGTAATAA < 1:2196518/38‑1 AGAATAGATGCTTGATTATGGGGGGATATCGTAATAA < 1:1941300/37‑1 TTGATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAA > 1:1715490/1‑71 GATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAAT > 1:1231632/1‑70 GATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAAT > 1:502825/1‑70 GATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAAT > 1:3580384/1‑70 GATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAAT > 1:2006445/1‑70 ATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAATC < 1:3374347/70‑1 ATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAAT > 1:2095915/1‑69 ATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGT < 1:8400/48‑1 TTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAATCAG > 1:1441261/1‑71 ATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAATCAGGG > 1:3581777/1‑71 ATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGAT > 1:3007232/1‑59 CACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1852490‑1852566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgattatGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAATCAGGG < Exported/1852580‑1852512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |