| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1903687 | 46 (0.780) | 10 (0.200) | 3/86 | NT | 20.5% | coding (2235/2889 nt) | ptr | protease III |
| ? | Exported | = 1903712 | 39 (0.780) | coding (2210/2889 nt) | ptr | protease III | |||||
TGTATTCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1903611‑1903687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaagatgTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTGGCAGC < Exported/1903712‑1903643 TGTATTCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCA < 1:202741/71‑1TGTATTCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCA < 1:2486607/71‑1 gaATTCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCA > 1:218030/3‑70 TATTCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCA > 1:802813/1‑69 TTCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAG < 1:1832922/70‑1 TCATCGTAGCCAGTCGGTACAAATACCGCTTCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGAT > 1:1028882/1‑71 TCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGAT > 1:682861/1‑71 CATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGAT > 1:209755/1‑70 ATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATG < 1:805718/70‑1 GTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCTGCTTTTTCAAAGAT < 1:3427107/55‑1 CCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAG > 1:1099557/1‑44 TCGGTGCTGTTACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCT < 1:54565/60‑1 TCGGTGCTGTTACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCT < 1:3547976/60‑1 TCGGTGCTGTTACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCT < 1:3459517/60‑1 TCGGTGCTGTTACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCT < 1:2737271/60‑1 TCGGTGCTGTTACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCT < 1:2432670/60‑1 ACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAA < 1:750006/39‑1 ACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAA < 1:994399/39‑1 ACCGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAA < 1:2188023/39‑1 CGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAATC > 1:2188590/1‑39 CGGCTTTTTCAAAGATGTAGTGGTCGATAAAAAACAATC > 1:2088551/1‑39 AAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGC < 1:3457315/47‑1 AAGATGTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTG < 1:669908/71‑1 AAGATGTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTG < 1:1087775/71‑1 GTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTGGCAGC > 1:489205/1‑71 TGTATTCATCGTAGCCAGTCGGTACAAATACCGCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1903611‑1903687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaagatgTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTGGCAGC < Exported/1903712‑1903643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |