New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 1915974 = | 68 (1.150) | 5 (0.090) | 3/92 | NT | 8.4% | coding (41/531 nt) | nudH | nucleotide hydrolase |
? | Exported | 1916005 = | 48 (0.900) | coding (10/531 nt) | nudH | nucleotide hydrolase |
GTATATAAAGCTTTATTTTGAGGTAGTCCGGTGATTGATGACGATGGCTACCGCCCAAACGTAGGTATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1916044‑1915974 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgtCATCAATCACCGGACTACCTCAAAATAAAGCTTTATATACGAAT > Exported/1916005‑1916048 GTATATAAAGCTTTATTTTGAGGTAGTCCGGTGATTGATGACGATGGCTACCGCCCAAACGTAGGTATCGT < 1:2546064/71‑1 ACGATGGCTACCGCCCAAACGTAGGTATCGTCATCAATCACCGG < 1:2937313/44‑1 GATGGCTACCGCCCAAACGTAGGTATCGTCATCAATCACCGGAC > 1:2930245/1‑44 GATGGCTACCGCCCAAACGTAGGTATCGTCATCAATCACCGGA > 1:3111617/1‑43 TGGCTACCGCCCAAACGTAGGTATCGTCATCAATCACCGGACTACCTCAAAATAAAGCTTTATATACGAAT > 1:319011/1‑71 TGGCTACCGCCCAAACGTAGGTATCGTCATCAATCACCGGACTACCTCAAAATAAAGCTTTA > 1:725161/1‑62 TCATCAATCACCGGACTACCTCAAAATAAAGCTTT > 1:1345124/1‑35 TCATCAATCACCGGACTACCTCAAAATAAAGCTTT > 1:715593/1‑35 GTATATAAAGCTTTATTTTGAGGTAGTCCGGTGATTGATGACGATGGCTACCGCCCAAACGTAGGTATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1916044‑1915974 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgtCATCAATCACCGGACTACCTCAAAATAAAGCTTTATATACGAAT > Exported/1916005‑1916048 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |