| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1939651 = | 73 (1.240) | 5 (0.100) | 3/88 | NT | 7.5% | intergenic (+7/+33) | fldB/ygfX | flavodoxin 2/hypothetical protein |
| ? | Exported | 1939681 = | 60 (1.180) | intergenic (+37/+3) | fldB/ygfX | flavodoxin 2/hypothetical protein | |||||
ACGGCGGATTTTGTTGCAACAAGAGACGCAAAGATAAAGATGACGGCAAAGCATATGCGCTAAGCCGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1939720‑1939651‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtcaTCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGCTG > Exported/1939681‑1939750 ACGGCGGATTTTGTTGCAACAAGAGACGCAAAGATAAAGATGACGGCAAAGCATATGCGCTAAGCCGTCA < 1:1179402/70‑1ACGGCGGATTTTGTTGCAACAAGAGACGCAAAGATAAAGATGACGGCAAAGCATATGCGCTAAGCCGTCA < 1:1533183/70‑1ACGGCGGATTTTGTTGCAACAAGAGACGCAAAGATAAAGATGACGGCAAAGCATATGCGCTAAGCCGTCA < 1:244165/70‑1 ATGACGGCAAAGCATATGCGCTAAGCCGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCG > 1:433058/1‑70 GGCAAAGCATATGCGCTAAGCCGTCATCTTTATCTTTGCGTCTCTTGTTGCA < 1:1057749/52‑1 GGCAAAGCATATGCGCTAAGCCGTCATCTTTATCTTTGCGTCTCTTGTTGCA < 1:1384167/52‑1 GGCAAAGCATATGCGCTAAGCCGTCATCTTTATCTTTGCGTCTCTTGTTGCA < 1:3689708/52‑1 CAAAGCATATGCGCTAAGCCGTCATCTTTATCTTTGCGTCTCTTGTTGCAAC > 1:3098971/1‑52 GCCGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCG > 1:1026282/1‑55 CCGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCTTCGTCCA < 1:1840102/71‑1 CGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAG < 1:838473/61‑1 CGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAG < 1:651573/61‑1 CGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCC > 1:3636285/1‑52 CGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCG < 1:1031911/41‑1 GTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAAT > 1:350978/1‑48 GTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAAT > 1:3585440/1‑48 GTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAAT > 1:2696761/1‑48 GTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAAT > 1:2167290/1‑48 GTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCG < 1:1617986/40‑1 TCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCT > 1:450101/1‑61 TCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCT > 1:715865/1‑61 TCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCA < 1:342027/54‑1 CATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTA > 1:1408290/1‑43 ATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGCTG < 1:123389/71‑1 ACGGCGGATTTTGTTGCAACAAGAGACGCAAAGATAAAGATGACGGCAAAGCATATGCGCTAAGCCGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1939720‑1939651‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtcaTCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGCTG > Exported/1939681‑1939750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |