New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 1987760 | 66 (1.120) | 5 (0.090) | 3/94 | NT | 7.9% | intergenic (‑38/+138) | ansB/yggN | periplasmic L‑asparaginase II/hypothetical protein |
? | Exported | = 1987772 | 56 (1.030) | intergenic (‑50/+126) | ansB/yggN | periplasmic L‑asparaginase II/hypothetical protein |
TGCGGCAAGTGCCGTCTTTTTGAAAAACTCCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1987690‑1987760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccATACAGAGCTAAGGGATAATGCGTAGCGTTCACGTAACTGGAGGAATGAAATGGAGTTTTTCAAAAAGA < Exported/1987772‑1987704 TGCGGCAAGTGCCGTCTTTTTGAAAAACTCCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTATCCC > 1:3649971/1‑71 CCGTCTTTTTGAAAAACTCCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTAT > 1:2693885/1‑57 TTTGAAAAACTCCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTATCCCATACAGAGCTAAGGGAT < 1:1098604/70‑1 TTTGAAAAACTCCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTATCCCATACAGAGCTAAGGGAT < 1:3252442/70‑1 TGAAAAACTCCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTATCCCATACAGAGCTAAGGGATAA < 1:2294760/70‑1 CCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTATCCCATACAGAGCTAAGGGATAA < 1:2227168/61‑1 CATTTCATTCCTCCAGTTACGTGACCGCTACGCATTATCCCATACAGAGCTAAGGGATAATGCGTAGCG < 1:3515640/69‑1 TCCCATACAGAGCTAAGGGATAATGCGTAGCGTTCACGTAACTGGAGGAATGAAATGGAGTTTTTCAAA > 1:2632181/1‑69 CCCATACAGAGCTAAGGGATAATTCGTAGCGTTCACGTA < 1:44864/39‑1 CCATACAGAGCTAAGGGATAATGCGTAGCGTTCACGTAACTGGAGGAATGAAATGGAGTTTTTCAAAAAGA > 1:1926553/1‑71 TGCGGCAAGTGCCGTCTTTTTGAAAAACTCCATTTCATTCCTCCAGTTACGTGAACGCTACGCATTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1987690‑1987760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccATACAGAGCTAAGGGATAATGCGTAGCGTTCACGTAACTGGAGGAATGAAATGGAGTTTTTCAAAAAGA < Exported/1987772‑1987704 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |