| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2075935 | 71 (1.200) | 3 (0.060) | 3/90 | NT | 4.5% | coding (2590/3093 nt) | ebgA | cryptic beta‑D‑galactosidase, alpha subunit |
| ? | Exported | = 2075944 | 65 (1.250) | coding (2599/3093 nt) | ebgA | cryptic beta‑D‑galactosidase, alpha subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2075861‑2075935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatacgCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGTCGC < Exported/2075944‑2075876 CCGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAA > 1:2077196/1‑71 CGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAAT < 1:3193486/71‑1 CGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAAT < 1:2097057/71‑1 CGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAAT < 1:2348434/71‑1 CGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAA < 1:2903841/70‑1 CGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAA < 1:2899512/70‑1 GGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATA > 1:88369/1‑71 AGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATAC > 1:2619740/1‑68 AGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATAC > 1:2903794/1‑68 AGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATAC > 1:3603100/1‑68 TACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATA > 1:3045646/1‑62 GCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATAC > 1:37184/1‑49 CACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATACGCCACCTGATCGTAT < 1:1720222/63‑1 CATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATACGCCACCTGATCGTATTC > 1:1161657/1‑63 TGCATCGGTTTCACCATGGGAATTAACGGCGAATACGCCACCTGATC < 1:3153584/47‑1 ATACGCCACCTGATCTTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGT > 1:3214724/1‑71 ATACGCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGT > 1:1658739/1‑71 ATACGCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAG < 1:1762875/70‑1 CGCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGTCGC > 1:2323559/1‑71 CGCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGTCGC < 1:3225456/71‑1 CGCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGTCGC < 1:3737371/71‑1 CGCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGTCG > 1:2099188/1‑70 CGCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATA > 1:2289639/1‑66 CCGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2075861‑2075935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatacgCCACCTGATCGTATTCGCCGTTAATTCCCATGGTGAAACCGATGCACGGAATGATGTGCGGATAGTCGC < Exported/2075944‑2075876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |