| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2077786 | 90 (1.530) | 3 (0.060) | 3/90 | NT | 3.4% | coding (731/1488 nt) | uxaA | altronate hydrolase |
| ? | Exported | = 2077797 | 90 (1.730) | coding (720/1488 nt) | uxaA | altronate hydrolase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2077712‑2077786‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcaGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTGG < Exported/2077797‑2077730 CGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCG > 1:3084898/1‑70 GTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCG < 1:3091789/69‑1 GTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCG < 1:1290508/69‑1 GTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCG < 1:2428725/69‑1 GTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCG < 1:805248/69‑1 CAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCAT > 1:3185335/1‑70 CAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCA > 1:2436800/1‑69 CAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCA > 1:3363567/1‑69 AGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCATCA > 1:1654348/1‑71 AGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCATCA < 1:3653501/71‑1 AGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCATCA > 1:3396422/1‑71 AGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCATCA > 1:2982778/1‑71 AGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCAT > 1:3674810/1‑69 CGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGC > 1:2654777/1‑59 GACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCATCAGCTGTATAACGTGATGC < 1:1273488/71‑1 AACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGC < 1:1658531/45‑1 CAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGC < 1:1682534/40‑1 CGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCA > 1:1743677/1‑36 CGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCA > 1:3223041/1‑36 CTGGCTCGCGTTTATCGTTGCGCATCAGCTGTATAACGT < 1:3128998/39‑1 GGCTCGCGTTTATCGTTGCGCATCAGCTGTATAACGTGA > 1:1022716/1‑39 CATCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTC < 1:1804905/70‑1 CATCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTT < 1:816231/65‑1 ATCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTG < 1:2821849/71‑1 ATCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTG < 1:2347168/71‑1 ATCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTG < 1:731453/71‑1 TCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTGG < 1:329885/71‑1 CAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTG > 1:3003551/1‑69 CAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTG > 1:295825/1‑69 CAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTG < 1:249516/69‑1 AGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTGG < 1:1221606/69‑1 AGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGA < 1:3603546/57‑1 AGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGA < 1:2012606/52‑1 AGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCCAACTGA < 1:478359/57‑1 CGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTATCGTTGCGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2077712‑2077786‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcaGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTGG < Exported/2077797‑2077730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |