New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 2123477 = | 59 (1.000) | 7 (0.120) | 3/100 | NT | 11.1% | coding (457/636 nt) | yraR | predicted nucleoside‑diphosphate‑sugar epimerase |
? | Exported | 2123505 = | 54 (0.930) | coding (429/636 nt) | yraR | predicted nucleoside‑diphosphate‑sugar epimerase |
GGAAGAAGCATTAATCGCCCAGAACTGGCCGAAATTGACCATTGCTCGCCCGTCGATGTTACTGGGCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2123547‑2123477 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAA > Exported/2123505‑2123573 GGAAGAAGCATTAATCGCCCAGAACTGGCCGAAATTGACCATTGCTCGCCCGTCGATGTTACTGGGCGATC > 1:1080019/1‑71 GCTCGCCCGTCGATGTTACTGGGCGATCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTC > 1:2300180/1‑70 GCTCGCCCGTCGATGTTACTGGGCGATCAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCT > 1:404766/1‑65 TCGCCCGTCGATGTTACTGGGCGATCAATGGTCAATTT < 1:3120727/38‑1 TCGCCCGTCGATGTTACTGGGCGATCAATGGTCAATTT < 1:3254220/38‑1 TCGCCCGTCGATGTTACTGGGCGATCAATGGTCAATTT < 1:3399019/38‑1 TCGCCCGTCGATGTTACTGGGCGATCAATGGTCAATTT < 1:620275/38‑1 GCCCGTCGATGTTACTGGGCGATCAATGGTCAATTTCG > 1:851561/1‑38 CAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAA > 1:891882/1‑70 GGAAGAAGCATTAATCGCCCAGAACTGGCCGAAATTGACCATTGCTCGCCCGTCGATGTTACTGGGCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2123547‑2123477 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAATGGTCAATTTCGGCCAGTTCTGGGCGATTAATGCTTCTTCCATCTCCCCTTTGACGCGGTTATAGAA > Exported/2123505‑2123573 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |