| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2246973 | 36 (0.610) | 3 (0.060) | 3/90 | NT | 7.2% | coding (686/1896 nt) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| ? | Exported | = 2246999 | 46 (0.880) | coding (712/1896 nt) | thiC | thiamin (pyrimidine moiety) biosynthesis protein | |||||
ATGAAGTTGCTGCCGGACGTGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTATTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2246901‑2246973‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattggCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAATGT < Exported/2246999‑2246937 ATGAAGTTGCTGCCGGACGTGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTATT < 1:1083934/71‑1 TGAAGTTGCTGCCGGACGTGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTATTG > 1:1906821/1‑71 TGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTA > 1:3096758/1‑50 TGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTA > 1:3427912/1‑50 AACATTAATCATCCGGAATCGGAGCCGATGATTATTGGCGTTAACTTTTACCAGGAAATTGCGACCA < 1:814063/67‑1 CATTAATCATCCGGAATCGGAGCCGATGATTATTGGCGTTAACTTTTACCAGGAAATTGCGACCAAT > 1:1497177/1‑67 CCGGAATCGGAGCCGATGATTATTGGCGTTAACTTTTACCAGGAAATTGC < 1:3254432/50‑1 ATTGGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGA < 1:837848/51‑1 ATTGGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGA < 1:2794017/51‑1 TTGGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAAT < 1:3370812/65‑1 TTGGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAAT < 1:3375061/65‑1 TTGGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTA < 1:2579651/63‑1 TTGGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTA < 1:3421363/63‑1 GGCGTTAACTTTTACCATGAAATTTCGACCAATAATCATCGGCTCCGATTC > 1:1100905/1‑51 GGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAATGT > 1:2126556/1‑65 GGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAAT > 1:3154722/1‑63 GGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAAT > 1:3650822/1‑63 GGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAAT > 1:2638727/1‑63 GGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGA > 1:414698/1‑58 GGCGTTAACTTTTACCAGGAAATTGCGACCAATAATCAT > 1:3231267/1‑39 ATGAAGTTGCTGCCGGACGTGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTATTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2246901‑2246973‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattggCGTTAACTTTTACCAGGAAATTGCGACCAATAATCATCGGCTCCGATTCCGGATGATTAATGT < Exported/2246999‑2246937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |