New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 229836616 (0.270)3 (0.060) 3/88 NT 16.3% intergenic (‑296/+33) katG/metF catalase/hydroperoxidase HPI(I)/5,10‑methylenetetrahydrofolate reductase
?Exported = 2298380 17 (0.330)intergenic (‑310/+19) katG/metF catalase/hydroperoxidase HPI(I)/5,10‑methylenetetrahydrofolate reductase

GAGAAAACAAGGCTGATAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATTTGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/2298290‑2298366
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgtgaAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCTCGAAATGAGGGCGGGAAAATAA  <  Exported/2298380‑2298311
                                                                                                                                                   
GAGAAAACAAGGCTGATAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAAT                                                                              <  1:2432110/71‑1
GAGAAAACAAGGCTGATAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAAT                                                                              <  1:1611607/71‑1
 AGAAAACAAGGCTGATAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAAT                                                                              <  1:1855473/70‑1
   AAAACAAGGGTGATAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATTTG                                                                           >  1:1557398/1‑71
   AAAACAAGGCTGATAACCTTATTTTCCAGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATTTG                                                                           >  1:330453/1‑71
      ACAAGGCTGATAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATTTGTGA                                                                        >  1:752978/1‑71
                TAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATTTG                                                                           >  1:1817441/1‑58
                TAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATT                                                                             <  1:3668919/56‑1
                TAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATT                                                                             <  1:812965/56‑1
                      TATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATTTGTGAAAATCACACAGTGAT                                                         >  1:3480142/1‑70
                                           AGGCAGCATTTTGTGCTCTGTTTAAAATTTGTGAAAATCACACAGTGA                                                          <  1:203471/48‑1
                                             GCAGCATTTTGTGCTCTGTTTAAAATTTGTGAAAATCACACAGTGATC                                                        >  1:2404234/1‑48
                                                                       TTGTGAAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCTCGAAATGAGGGCGGGA        >  1:2511086/1‑70
                                                                           GAAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCT                        <  1:1677158/50‑1
                                                                           GAAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCT                        <  1:2263218/50‑1
                                                                           GAAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCT                        <  1:3290096/50‑1
                                                                           GAAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCT                        <  1:3295302/50‑1
                                                                           GAAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATG                              >  1:687562/1‑44
                                                                            AAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCTCGAAATGAGGGCGGGAAAATAA  <  1:1367497/71‑1
                                                                                                                                                   
GAGAAAACAAGGCTGATAACCTTATTTTCCCGCCCTCATTTCGAGGCAGCATTTTGTGCTCTGTTTAAAATTTGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/2298290‑2298366
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgtgaAAATCACACAGTGATCACAAATTTTAAACAGAGCACAAAATGCTGCCTCGAAATGAGGGCGGGAAAATAA  <  Exported/2298380‑2298311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.