New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 2433989 = | 90 (1.530) | 3 (0.050) | 3/98 | NT | 3.4% | coding (1007/1266 nt) | rhlB | ATP‑dependent RNA helicase |
? | Exported | 2434012 = | 84 (1.480) | coding (1030/1266 nt) | rhlB | ATP‑dependent RNA helicase | |||||
Rejected: Frequency below/above cutoff threshold. |
CCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2434034‑2433989 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGA > Exported/2434012‑2434067 CCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAG < 1:1681747/45‑1 CAATACGGTGAACGTAATCTTCACAGTATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCT < 1:1383832/66‑1 AATACGGTGAACGTAATCTTCACAGTATTGGTCGTACAGGTAGCGCAGGCGCAAGCGG > 1:2253447/1‑58 CGGTGAACGTAATCTTCACAGTATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACT < 1:1958819/59‑1 TATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGA > 1:1804156/1‑57 TATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGA > 1:3145019/1‑57 TATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTG > 1:3413939/1‑56 TATAGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGA > 1:1416665/1‑57 CCTGCGCGACCTGTACGACCAATACGGTGAACGTAATCTTCACAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2434034‑2433989 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGA > Exported/2434012‑2434067 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |