| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2437945 = | 54 (0.920) | 5 (0.090) | 3/94 | NT | 10.1% | intergenic (‑9/‑208) | rep/yifN | DNA helicase and single‑stranded DNA‑dependent ATPase/ECK3769:JW3750:b3777; conserved hypothetical protein |
| ? | Exported | 2437979 = | 39 (0.720) | intergenic (‑43/‑174) | rep/yifN | DNA helicase and single‑stranded DNA‑dependent ATPase/ECK3769:JW3750:b3777; conserved hypothetical protein | |||||
CGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2438018‑2437945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGAGAG > Exported/2437979‑2438048 CGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGA < 1:1893471/71‑1 GTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAG > 1:1140490/1‑70 TTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGC > 1:1082419/1‑70 TTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGC > 1:1217207/1‑70 TTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGC > 1:3255313/1‑70 TTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGC > 1:2227159/1‑70 TCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAG > 1:205655/1‑45 TACAATCCTCCCCCCGTTCGAAGATTGAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCG > 1:3589219/1‑71 TACAATCCTCCCCCCGTTCGAAGATTGAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCG > 1:1720453/1‑71 ACAATCCTCCCCCCGTTCGAAGATTGAGCAGAATCGCATTTGAATGTG < 1:1471052/48‑1 CAATCCTCCCCCCGTTCGAAGATTGAGCAGAATCGCATTTGAATGTG < 1:1095566/47‑1 AATCCTCCCCCCGTTCGAAGATTGAGCAGAATCGCATTTGAATGTGAC > 1:1745924/1‑48 GCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGA < 1:733852/70‑1 CAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGA > 1:717980/1‑69 AGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGAGAG < 1:2149992/71‑1 AGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGAGAG < 1:2894966/71‑1 AGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGAGAG < 1:1409636/71‑1 CGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2438018‑2437945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGAGAG > Exported/2437979‑2438048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |