| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2467762 = | 68 (1.150) | 13 (0.260) | 3/88 | NT | 20.2% | coding (1226/1542 nt) | atpA | F1 sector of membrane‑bound ATP synthase, alpha subunit |
| ? | Exported | 2467786 = | 44 (0.860) | coding (1250/1542 nt) | atpA | F1 sector of membrane‑bound ATP synthase, alpha subunit | |||||
TTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2467838‑2467762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcaaCACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAGTATGCGCCG > Exported/2467786‑2467850 TTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGG < 1:3007904/71‑1TTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGG < 1:2892812/71‑1 TCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT > 1:384308/1‑71 TCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT > 1:1462691/1‑71 TCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT > 1:2788379/1‑71 CTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT < 1:629390/70‑1 TTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA < 1:2939258/70‑1 TTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT < 1:3524572/48‑1 GTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGA > 1:1197940/1‑36 GTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGA > 1:275282/1‑36 GTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGA > 1:1299021/1‑36 GTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGA > 1:161995/1‑36 TGCATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAA > 1:1173639/1‑70 CATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGA < 1:2453110/48‑1 CATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGA < 1:1486208/48‑1 CATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGA < 1:2857923/48‑1 CATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGA < 1:2671969/48‑1 CATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGA < 1:2519207/48‑1 CATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGA < 1:1901849/48‑1 ATCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGA < 1:534507/47‑1 TCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAA > 1:1823647/1‑48 TCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAA > 1:3403170/1‑48 TCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAA > 1:1384817/1‑48 TCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAA > 1:2475087/1‑48 TCGTCAAGGTCGGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAA > 1:846951/1‑48 GATGCAACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAGTATGCGCC < 1:1852879/71‑1 ATGCAACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAGTATGCGCCG < 1:1459698/71‑1 CAACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAAC < 1:823826/57‑1 AACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAGTATGCG < 1:885850/64‑1 ACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAG < 1:2870389/57‑1 ACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGA < 1:3406465/46‑1 TTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2467838‑2467762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcaaCACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAGTATGCGCCG > Exported/2467786‑2467850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |