| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2520056 = | 106 (1.800) | 4 (0.080) | 3/86 | NT | 4.9% | intergenic (‑10/‑248) | gmk/ligB | guanylate kinase/DNA ligase, NAD(+)‑dependent |
| ? | Exported | 2520091 = | 66 (1.330) | intergenic (‑45/‑213) | gmk/ligB | guanylate kinase/DNA ligase, NAD(+)‑dependent | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGCAAGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2520131‑2520056‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatacgaGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGCGCAAAGTTGTTGCGT > Exported/2520091‑2520158 AGCAAGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCAC > 1:2078042/1‑70AGCAAGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCAC > 1:2425845/1‑70 GCAAGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACA > 1:1776119/1‑70 CAAGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACATA > 1:781322/1‑71 CAAGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACATA > 1:2581195/1‑71 AGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACATAC > 1:222670/1‑70 CTACGTCACATGGCAGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACATACGA > 1:171801/1‑68 CCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACAT > 1:301139/1‑51 GTATGTAGGCTTTATTTCGCTAATCACATACGAGCTTATTATACACGG < 1:493924/48‑1 ATGTAGGCTTTATTTCGCTAATCACATACGAGCTTATTATACACGGCG > 1:2007747/1‑48 ATGTAGGCTTTATTTCGCTAATCACATACGAGCTTATTATACACGGCG > 1:332107/1‑48 GTAGGCTTTATTTCGCTAATCACATACGAGCTTATTATACA > 1:1976208/1‑41 ACATACGAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGCGCAAAGTTGT > 1:332982/1‑71 ACATACGAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGCGCAAAGTTG < 1:2709859/70‑1 TACGAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGCGCAAAGTTGTTGC < 1:1670969/71‑1 ACGAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGCGCAAAGTTGTTGCG > 1:2884798/1‑71 CGAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGCGCAAAGTTGTTGCGT > 1:2919923/1‑71 GAGCTTATTATACCCGGCGCGGCCATGTGACGTAGCCCT < 1:1044256/39‑1 GAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGC < 1:218688/55‑1 GAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGC < 1:619879/55‑1 GAGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGC < 1:939961/55‑1 AGCAAGGGCTACGTCACATGGCCGCGCCGTGTATAATAAGCTCGTATGTAGGCTTTATTTCGCTAATCACATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2520131‑2520056‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatacgaGCTTATTATACACGGCGCGGCCATGTGACGTAGCCCTTGCTCACACTTTTTGCGCAAAGTTGTTGCGT > Exported/2520091‑2520158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |