| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2593308 | 53 (0.900) | 6 (0.120) | 3/90 | NT | 11.6% | coding (422/567 nt) | slp | outer membrane lipoprotein |
| ? | Exported | = 2593325 | 45 (0.860) | coding (405/567 nt) | slp | outer membrane lipoprotein | |||||
GCCAGAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2593234‑2593308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGGGAT < Exported/2593325‑2593256 gcaAGAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACC > 1:2631542/4‑71 CCAGAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCT > 1:1187088/1‑71 AGAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGG < 1:2515386/71‑1 AGAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTG > 1:2157186/1‑70 AGAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTG > 1:3420802/1‑70 GAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGA > 1:3543900/1‑71 CCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGAAGTGAATATGCATGGCATCC < 1:2173425/70‑1 CCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGAAGTGAATATGCAGGGCATCC < 1:65131/70‑1 CCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGAAGTGAATATGCAGGGCATCC < 1:3642406/70‑1 CAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGAAGTGAATATGCAGGGCATCCAGGT > 1:2067971/1‑71 CAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGAAGTGAATATGCAGGGCATCCAGGT > 1:3558576/1‑71 AGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGAAGTGAATATGCAGGGCATCCAGGTG < 1:1768231/71‑1 CCTGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCT < 1:281627/69‑1 CTGGAAGTGAATATGCAGGGCATCCAGGTGTTGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGT < 1:22293/70‑1 CTGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGT < 1:2334575/70‑1 TGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAG < 1:3453725/40‑1 TGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAG < 1:495202/40‑1 TGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAG < 1:949674/40‑1 GGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGG > 1:2139478/1‑70 GAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGGGA > 1:430198/1‑71 GAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATA > 1:413297/1‑52 AAGTGAAAATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGGGAT < 1:382028/71‑1 GCCAGAATGCACCATAGCCGTAATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2593234‑2593308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGGGAT < Exported/2593325‑2593256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |