| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2594154 | 79 (1.340) | 7 (0.130) | 4/92 | NT | 9.8% | intergenic (‑425/+716) | slp/arsC | outer membrane lipoprotein/arsenate reductase |
| ? | Exported | = 2594172 | 58 (1.090) | intergenic (‑443/+698) | slp/arsC | outer membrane lipoprotein/arsenate reductase | |||||
TCTTTAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2594081‑2594154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcaAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAAATG < Exported/2594172‑2594103 TCTTTAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATAT > 1:141167/1‑71 TTTAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATAT < 1:92077/69‑1 TTTAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATAT < 1:2907210/69‑1 TAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATT > 1:808923/1‑68 TAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATT < 1:130304/68‑1 TAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATT < 1:3279801/68‑1 ATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCAAACATGGGCAGAAATGTCT < 1:727586/70‑1 ATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCAAACATGGGCAGAAATGTCT < 1:323605/70‑1 TTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCAAACATGGGCAGAAATGTCTGA > 1:2380223/1‑70 TTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCAAACATGGGCAGAAATGTCT < 1:661950/64‑1 TTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCAAACATGGGCAGAAATGTCTGA < 1:988711/65‑1 TAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCAAACATGGGCAGAAATGTCTGAAT > 1:3058359/1‑61 TAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCAAACATGGGCAGAAATGTCTGA > 1:1110457/1‑59 TTCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAA < 1:3227175/71‑1 TTCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAA < 1:1043243/71‑1 TTCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAA < 1:1618901/71‑1 TCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAA > 1:3159704/1‑60 TCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAA > 1:2456219/1‑60 TCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTT > 1:810567/1‑58 CAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAAA < 1:1976369/70‑1 CAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAAA < 1:1269016/70‑1 AAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAAATG > 1:1275305/1‑71 TCTTTAAATAAGGCGTGTGTGACATTTTTTTTGGGTTAAGCGTCTCGTATTGAAATACTTCGAATTGATATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2594081‑2594154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcaAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAAATG < Exported/2594172‑2594103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |