| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2618363 = | 57 (0.970) | 4 (0.080) | 3/92 | NT | 7.2% | coding (171/246 nt) | yhhP | conserved hypothetical protein required for cell growth |
| ? | Exported | 2618392 = | 51 (0.960) | coding (200/246 nt) | yhhP | conserved hypothetical protein required for cell growth | |||||
ACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2618435‑2618363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaagAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCTGATTGGCTTCGATGC > Exported/2618392‑2618461 ACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAA < 1:2935082/71‑1 CGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAG > 1:3735446/1‑71 CGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAG > 1:3731248/1‑71 CGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAG > 1:3186605/1‑71 TTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAA < 1:144920/64‑1 CAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATA > 1:1168298/1‑55 CTCTTTAGCAACCAGTTCGTGTTCCATAAAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGG > 1:2085393/1‑71 TAGCAACCAGTTCGTGTTCCATAAAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGG < 1:1526067/69‑1 TAGCAACCAGTTCGTGTTCCATAAAGAGACGGATGGACTGCCTTATCGTTAT > 1:2132090/1‑52 TAGCAACCAGTTCGTGTTCCATAAAGAGACGGATGGACTGCCTTATCGTTAT > 1:2900390/1‑52 ctAAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCTGATTGGCTTC < 1:1936795/68‑1 AAAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGAT < 1:544411/52‑1 AAGATACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCTGATTGGCTTCG < 1:1500581/69‑1 AAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCTGATTGGCTTCGAT < 1:2500355/71‑1 AAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCTGATTGGCTTCGA < 1:2269031/70‑1 AAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCTGATTGGCTTCGA < 1:1285901/70‑1 AAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTT > 1:3161042/1‑48 AAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTT > 1:3554598/1‑48 AAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGAGGTT > 1:456009/1‑48 GAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCT > 1:2100081/1‑56 GAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCT > 1:3578952/1‑56 GAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAG < 1:2292944/51‑1 GAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAG < 1:3530347/51‑1 GAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAG < 1:1840191/51‑1 GAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTGGATAGGGGCTGATTGGCTTCGATGC < 1:1827491/71‑1 GAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAA > 1:3449546/1‑39 ACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2618435‑2618363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaagAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGATAGGGGCTGATTGGCTTCGATGC > Exported/2618392‑2618461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |