| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2659853 = | 51 (0.860) | 9 (0.180) | 3/86 | NT | 18.6% | coding (211/831 nt) | glpG | predicted intramembrane serine protease |
| ? | Exported | 2659878 = | 36 (0.720) | coding (236/831 nt) | glpG | predicted intramembrane serine protease | |||||
CCGGACCTGCGCGTTCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2659928‑2659853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctgcATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATGAT > Exported/2659878‑2659947 CCGGACCTGCGCGTTCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGG < 1:2977990/71‑1CCGGACCTGCGCGTTCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATG < 1:1782141/70‑1 GACCTGCGCGTTCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGGCCT > 1:1396475/1‑71 GACCTGCGCGTTCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGGCCT < 1:1707886/71‑1 CCTGCGCGTTCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGGCCTGC < 1:2839757/71‑1 TCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGGCCTGC > 1:2009627/1‑62 CAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGG < 1:1119978/44‑1 AACGGCGATAATGCAGGCCACTGCCGGTATGGCCT > 1:2058195/1‑35 GCAGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGT < 1:3087850/60‑1 GCAGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGT < 1:2416855/60‑1 GCAGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTGTCTTTGCCGCCTTGCGT < 1:1138289/60‑1 CAGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACG > 1:1892888/1‑64 CAGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACG > 1:919189/1‑64 AGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:1584393/1‑60 AGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:382740/1‑60 AGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:2583716/1‑60 AGGCCACTGCCGGTATGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:2882318/1‑60 GGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGAT > 1:1351814/1‑71 GGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTG > 1:2124549/1‑65 GGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTG > 1:3117216/1‑65 GCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGAT > 1:22590/1‑70 CCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGA > 1:1251964/1‑71 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGAT > 1:995721/1‑71 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGAT > 1:3518548/1‑71 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGG > 1:1618014/1‑50 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:1287294/1‑41 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:2784908/1‑41 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:3451364/1‑41 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:2610929/1‑41 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:3668859/1‑41 CTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:2265055/1‑41 CTGCATTATAGCCGTTATCCTTTCTTTGCCGCCTTGCGTGA > 1:3388546/1‑41 GCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATGA > 1:1196049/1‑71 CATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATGAT > 1:1339223/1‑71 CATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATGA < 1:2677682/70‑1 CATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATG < 1:3439473/69‑1 CCGGACCTGCGCGTTCACGCAAGGCGGCAAAGAAAGGATAACGGCGATAATGCAGGCCACTGCCGGTATGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2659928‑2659853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctgcATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATGAT > Exported/2659878‑2659947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |