| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2753118 | 51 (0.860) | 8 (0.150) | 4/90 | NT | 12.9% | coding (224/426 nt) | zntR | DNA‑binding transcriptional activator |
| ? | Exported | = 2753130 | 63 (1.210) | coding (236/426 nt) | zntR | DNA‑binding transcriptional activator | |||||
TTATCCGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2753043‑2753118‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctgaCAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACTGAAACCTAGTT < Exported/2753130‑2753061 TTATCCGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGAT > 1:3653387/1‑71 TATCCGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATC > 1:1112191/1‑71 ATCCGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATC < 1:1269149/70‑1 CGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGA < 1:2977045/71‑1 CGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTG < 1:783070/70‑1 CGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTG < 1:2099624/70‑1 CGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTG < 1:2679069/70‑1 CCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTAT > 1:396225/1‑71 CCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTAT > 1:295882/1‑71 GTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTATGGTGTTC < 1:844245/60‑1 AGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTATGGTGTTCAGGAT > 1:1124564/1‑59 AGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTATGGTGTTCAGGAT > 1:426143/1‑59 CGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTATGGTGTTCAG < 1:868994/48‑1 CGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTATGGTGTTCAG < 1:484786/48‑1 CGCGAGTTGCTGTCGATCCGCATCGATCCTGACAGGTATGGTGTTCAG < 1:2663765/48‑1 TCCTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCA < 1:2744369/61‑1 TCCTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCA < 1:3152973/61‑1 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACTGAAACC < 1:2739805/69‑1 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACTGAAACC < 1:2953159/69‑1 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACT > 1:3008546/1‑63 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACT > 1:242871/1‑63 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACT > 1:3485188/1‑63 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACT > 1:366541/1‑63 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACT > 1:1513436/1‑63 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGA > 1:2352689/1‑50 CTGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGA > 1:2121120/1‑50 TGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGA > 1:3641866/1‑53 TGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGA > 1:2717701/1‑53 TGACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACT < 1:3581970/43‑1 ACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACTGAAACCTAGTT > 1:1237028/1‑71 ACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAA > 1:3650245/1‑39 ACAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAA > 1:1901853/1‑39 ACAGGTATGGTGTTCAGGATCGATGAGGATCGACAGCAACTCGCGGATCGACTCCAGACTGAAACCTAGTT > 1:3041279/1‑71 TTATCCGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2753043‑2753118‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctgaCAGGTATGGTGTTCAGGATCGATGCGGATCGACAGCAACTCGCGGATCGACTCCAGACTGAAACCTAGTT < Exported/2753130‑2753061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |