New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 2782586 | 55 (0.930) | 6 (0.110) | 3/92 | NT | 9.7% | coding (3561/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent |
? | Exported | = 2782595 | 62 (1.170) | coding (3570/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent |
GAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2782514‑2782586 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcGTAGTACTTGCTGTCCGGGTGGCTGAAGTACCAACCCGAAACCGATGCACCGGGCCACATGGCGA < Exported/2782595‑2782531 GAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGA > 1:2919155/1‑69 CTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGACAGC > 1:127957/1‑69 TCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGAC > 1:424473/1‑53 CCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGACAGCGTAGTACTTGCTGTCCGG > 1:3733821/1‑63 TTTCGGGTTGGTACTTCAGCCACCCGGACAGCGTAGTACTTGCTGTC < 1:2342572/47‑1 TTTCGGGTTGGTACTTCAGCCACCCGGACAGCGTAGTACTTGCTGTC < 1:3274344/47‑1 TTTCGGGTTGGTACTTCAGCCACCCGGACAGCGTAGTACTTGCTGTC < 1:3482547/47‑1 TCGGGTTGGTACTTCAGCCACCCGGACAGCGTAGTACTTGCTGTCCG > 1:2897120/1‑47 TCGGGTTGGTACTTCAGCCACCCGGACAGCGTAGTACTTGCTGTCCG > 1:3167699/1‑47 CAGCGTAGTACTTGCTGTCCGGGTGGCTGAAGTACCAACCCGAAACCGATGCACCGGGCCACATGGCGA > 1:2781850/1‑69 CAGCGTAGTACTTGCTGTCCGGGTGGCTGAAGTACCAACCCGAAACCGATGCACCGGGCCACATGGCGA > 1:3734225/1‑69 GAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2782514‑2782586 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcGTAGTACTTGCTGTCCGGGTGGCTGAAGTACCAACCCGAAACCGATGCACCGGGCCACATGGCGA < Exported/2782595‑2782531 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |