| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2834189 | 85 (1.440) | 12 (0.220) | 4/96 | NT | 12.1% | coding (1503/1647 nt) | groL | Cpn60 chaperonin GroEL, large subunit of GroESL |
| ? | Exported | = 2834202 | 94 (1.690) | coding (1516/1647 nt) | groL | Cpn60 chaperonin GroEL, large subunit of GroESL | |||||
TTACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2834117‑2834189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATTCTTC < Exported/2834202‑2834133 TTACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTC > 1:3463469/1‑71TTACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTC > 1:1786979/1‑71 TACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG > 1:3413358/1‑71 ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT > 1:1264747/1‑71 ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT > 1:1611676/1‑71 ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT > 1:2134264/1‑71 ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT > 1:232372/1‑71 ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:964539/70‑1 ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:3012783/70‑1 ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:2657502/70‑1 CAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:2792241/69‑1 AAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAAC < 1:378339/71‑1 ATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:1396675/41‑1 TCGACGTGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:3707611/37‑1 TCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:2313945/37‑1 TCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:592919/37‑1 TCGACATGGGTATCCTGGATCCAACCAAAGTAACTCG < 1:383204/37‑1 GTATCCTGGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAA < 1:3383651/43‑1 GTATCCTGGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAA < 1:3504793/43‑1 GTATCCTGGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAA < 1:1870975/43‑1 ATCCTGGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAACG > 1:3322574/1‑43 ATCCTGGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAACG > 1:1027325/1‑43 ATCCTGGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAACG > 1:346934/1‑43 GGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAAC > 1:1848873/1‑37 GGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAAC > 1:2940597/1‑37 GGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAAC > 1:717497/1‑37 GGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAAC > 1:2310054/1‑37 GGATCCAACCAAAGTAACTCGTACTGCAGAGCAGAAC > 1:575962/1‑37 CGTACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATTCT < 1:3087849/71‑1 CGTACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATTCT < 1:1739996/71‑1 CGTACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATT > 1:3584087/1‑69 CGTACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATT < 1:944547/69‑1 GTACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATTCTT < 1:2183240/71‑1 TACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATTCTTC > 1:2884426/1‑71 TTACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2834117‑2834189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtACTGCAGAGCAGAACGAGTTACTTTGGTTGGATCCAGGATACCCATGTCGATCATGTTGCCGTATTCTTC < Exported/2834202‑2834133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |