| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2891261 | 62 (1.050) | 11 (0.220) | 3/88 | NT | 15.4% | intergenic (‑225/‑85) | ppa/ytfQ | inorganic pyrophosphatase/predicted sugar transporter subunit |
| ? | Exported | = 2891268 | 67 (1.320) | intergenic (‑232/‑78) | ppa/ytfQ | inorganic pyrophosphatase/predicted sugar transporter subunit | |||||
AAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2891205‑2891261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtaacAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTCATCT < Exported/2891268‑2891199 AAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGA > 1:1156423/1‑51AAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGA > 1:1185370/1‑51 ATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTACATCACA > 1:1205323/1‑70 ATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTACATCACA > 1:2832710/1‑70 ATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTACATCACA > 1:1892820/1‑70 ATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTA < 1:178010/49‑1 ATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTA < 1:96822/49‑1 ATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTA < 1:1724123/49‑1 TAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTAC < 1:1632302/48‑1 TAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTAC < 1:2688419/48‑1 TAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTAC < 1:2532204/48‑1 TAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTAC < 1:1387206/48‑1 TAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACAGATTGCGTTAC < 1:1086353/48‑1 GTAACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAAT > 1:3647520/1‑50 TAACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTC < 1:1429073/70‑1 TAACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAA < 1:1953284/40‑1 TAACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAA < 1:3411928/40‑1 TAACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAA < 1:1192607/40‑1 AACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTC < 1:491970/69‑1 AACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAA > 1:2703824/1‑41 AACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAA > 1:1296723/1‑41 AACAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAA > 1:988031/1‑41 CAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTCATCT > 1:1748590/1‑71 CAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTCATCT < 1:1664797/71‑1 CAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTCATCT > 1:1541813/1‑71 CAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTCAT > 1:2994661/1‑69 AAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2891205‑2891261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtaacAGATTGCGTTACATCACACTTCAAAAAAGTAAATAAAACGTTAATCACAAGTTTGTAATCGCTTTCATCT < Exported/2891268‑2891199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |