| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2951376 | 58 (0.980) | 3 (0.060) | 3/92 | NT | 4.9% | coding (578/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport |
| ? | Exported | = 2951392 | 64 (1.200) | coding (562/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAAAGAGGGCATGGCGCAGCGATTCAACAGTAGCCTCGCCGAGCAGTTGCTTCATCTCAGTGAGATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2951307‑2951376‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataccGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGCAACTGCTCGGCGAGGCTACTGTTGAATCGCTGC < Exported/2951392‑2951323 AAAAAGAGGGCATGGCGCAGCGATTCAACAGTAGCCTCGCCGAGCAGTTGCTTCATCTCAGTGAGATAC > 1:1862821/1‑69AAAAAGAGGGCATGGCGCAGCGATTCAACAGTAGCCTCGCCGAGCAGTTGCTTCATCTCAGTGAGATAC > 1:789894/1‑69 GCGATTCAACAGTAGCCTCGCCGAGCAGTTGCTTCATCTCAGTGAGATACCGGTTATTTGATCAACTGGTA < 1:3067463/71‑1 ATTCAACAGTAGCCTCGCCGAGCAGTTGCTTCATCTCAGTGAGA > 1:2959260/1‑44 ATTCAACAGTAGCCTCGCCGAGCAGTTGCTTCATCTCAGTGAGA > 1:88010/1‑44 CGCCGAGCAGTTGCTTCATCTCAGTGAGATACCGGTTATTTGATCAACTG < 1:3578507/50‑1 CCGAGCAGTTGCTTCATCTCAGTGAGATACCGGTTATTTGATCAACTGGT > 1:2650641/1‑50 ATACCGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGCAACTGCTCGGCGAGGCTACTGTTGAATCG < 1:2211039/71‑1 CGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGCAACTGCTCGGCGAGGCTACTGTTGAATCGCTGC > 1:1069678/1‑71 CGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGC < 1:1366502/38‑1 CGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGC < 1:232555/38‑1 AAAAAGAGGGCATGGCGCAGCGATTCAACAGTAGCCTCGCCGAGCAGTTGCTTCATCTCAGTGAGATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2951307‑2951376‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataccGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGCAACTGCTCGGCGAGGCTACTGTTGAATCGCTGC < Exported/2951392‑2951323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |