| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2957932 | 52 (0.880) | 4 (0.080) | 4/90 | NT | 7.0% | coding (247/606 nt) | osmY | periplasmic protein |
| ? | Exported | = 2957954 | 60 (1.150) | coding (269/606 nt) | osmY | periplasmic protein | |||||
ATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2957860‑2957932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccgCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCGGTGCTCTTGATGTTGTCATGATCCACCA < Exported/2957954‑2957885 ATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAAC < 1:2024164/71‑1 TCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACC > 1:3169701/1‑71 TCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACC < 1:693381/71‑1 ACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCG < 1:2346063/70‑1 CCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAA > 1:1167865/1‑64 CGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAA > 1:2058380/1‑63 CGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAA > 1:443177/1‑63 GTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACC < 1:487927/60‑1 CCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCG < 1:1997834/50‑1 CCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCG < 1:1781233/50‑1 TGGAGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGCTCAGGGTCACGACTTTTTGATC > 1:2017346/1‑71 GGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACC < 1:202896/46‑1 GGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACC < 1:3052912/46‑1 GGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACC < 1:1599502/46‑1 GTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGCTCAGGGTCACGACTTTTTGATCG < 1:3734841/70‑1 TGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGCTCAGGGTCACGACTTTTTGATCGGT > 1:914191/1‑71 TGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGCTCAGGGTCACGACTTTTTGATCGGT < 1:3311861/71‑1 TCATGACAACATCAAGAGCACCGATATCTCTGTAAA < 1:853388/36‑1 TCATGACAACATCAAGAGCACCGATATCTCTGTAAA < 1:914495/36‑1 TCATGACAACATCAAGAGCACCGATATCTCTGTAAA < 1:2888983/36‑1 AAACCGCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCG < 1:1132922/48‑1 ACCGCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCGGTGCTCTTGATGTT < 1:3177086/60‑1 CCGCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCGGTGCTCTTGATGTTGTCATGATCCAC < 1:944252/71‑1 CCGCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCG > 1:824987/1‑45 CCGCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCG > 1:718185/1‑45 CCGCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCG > 1:3087015/1‑45 CGCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCGGTGCTCTTGATGTTGTCATGATCCACC < 1:3168197/71‑1 GCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCGGTGCTCTTGATGTTGTCATGATCCACCA < 1:1751133/71‑1 ATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2957860‑2957932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccgCTCAGGGTCACGACTTTTTGATCGGTTTTTACAGAGATATCGGTGCTCTTGATGTTGTCATGATCCACCA < Exported/2957954‑2957885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |