| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2977650 = | 54 (0.920) | 6 (0.110) | 3/94 | NT | 9.7% | coding (628/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | Exported | 2977677 = | 62 (1.140) | coding (655/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
TACGCGCGAAGGTCAGTACCGTATTAGGGTTGTTCGCCAGTGAAATGATTGCCGAGGCGATAGTCTGGTAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2977722‑2977650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACC > Exported/2977677‑2977745 TACGCGCGAAGGTCAGTACCGTATTAGGGTTGTTCGCCAGTGAAATGATTGCCGAGGCGATAGTCTGGTAA < 1:1255225/71‑1 CGCGCGAAGGTCAGTACCGTATTAGGGTTGTTCGCCAGTGAAATGATTGCCGAGGCGATAGTCTGGTAATC > 1:1403083/1‑71 CGCGCGAAGGTCAGTACCGTATTAGGGTTGTTCGCCAGTGAAATGATTGCCGAGGCGAAAGTCTGGTAATC > 1:245748/1‑71 TAGGGTTGTTCGCCAGTGAAATGATTGCCGAGGCGATAGTCTGGTAATCtg < 1:141789/51‑3 TGATTGCCGAGGCGATAGTCTGGTAATCATTTCACTGGCGAACAACCCTAATACGGTCCTGACCTTCGC < 1:3353031/69‑1 TGATTGCCGAGGCGATAGTCTGGTAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGC < 1:2333219/69‑1 TGATTGCCGAGGCGATAGTCTGGTAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGC < 1:46566/69‑1 ATTGCCGAGGCGATAGTCTGGTAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGC > 1:1784674/1‑69 ATTGCCGAGGCGATAGTCTGGTAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGC > 1:744441/1‑69 ATTGCCGAGGCGATAGTCTGGTAATCATTTCACTGGCGAACAACCCT < 1:2240133/47‑1 AATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTA < 1:1530640/71‑1 AATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTA < 1:3023265/71‑1 TCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACC > 1:3491781/1‑71 TCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCG < 1:3624969/63‑1 CATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC < 1:1917483/51‑1 TACGCGCGAAGGTCAGTACCGTATTAGGGTTGTTCGCCAGTGAAATGATTGCCGAGGCGATAGTCTGGTAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2977722‑2977650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACC > Exported/2977677‑2977745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |