| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 95431 | 85 (1.440) | 6 (0.110) | 4/92 | NT | 8.1% | coding (2413/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon |
| ? | Exported | = 95447 | 59 (1.110) | coding (2429/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon | |||||
Only 100 of 137 total aligned reads displayed.
GATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAA > Exported/95361‑95501 | gATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAAC < 1:104795‑M1/71‑1 (MQ=255) aTGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACg > 1:830846/1‑71 (MQ=255) aTGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACg > 1:1341002/1‑71 (MQ=255) aCTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGaa > 1:3299346/1‑71 (MQ=255) cTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAAt > 1:317996/1‑71 (MQ=255) tCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCg < 1:207935/70‑1 (MQ=255) cGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGt < 1:75795/67‑1 (MQ=255) cGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtct < 1:2177077/70‑1 (MQ=255) cGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtct < 1:106776/70‑1 (MQ=255) gTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtctc > 1:1977301/1‑70 (MQ=255) gTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtctc > 1:2677856/1‑70 (MQ=255) gTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtctc > 1:3059435/1‑70 (MQ=255) cAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCAt > 1:178781/1‑71 (MQ=255) aGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAAt < 1:2766109/60‑1 (MQ=255) aGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAAt < 1:275002/60‑1 (MQ=255) ggTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGaa < 1:1146096/57‑1 (MQ=255) ggTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGaa < 1:3613965/57‑1 (MQ=255) ggTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtct > 1:582262/1‑64 (MQ=255) tATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgtttg < 1:2381172‑M2/71‑6 (MQ=255) tCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgtttg < 1:3588204‑M2/69‑6 (MQ=255) tCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCa < 1:3324780/71‑1 (MQ=255) cACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACatggagaacgattcacgtttgtatt < 1:311253‑M1/71‑26 (MQ=255) cACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACatggagaacgattcacgttt > 1:249873‑M1/1‑46 (MQ=255) cACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACatggagaacgattcacgttt > 1:1693963‑M1/1‑46 (MQ=255) cACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACatggagaacgattcacgttt > 1:1465750‑M1/1‑46 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGc > 1:561042/1‑70 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGc > 1:1790099/1‑70 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCg < 1:1346484/71‑1 (MQ=255) tGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATg > 1:2138650/1‑71 (MQ=255) tGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATg > 1:3411688/1‑71 (MQ=255) tGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATg > 1:1006913/1‑71 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtc < 1:3272479/52‑1 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATg > 1:1278318‑M2/1‑57 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATg > 1:3607458‑M2/1‑57 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc > 1:1681583/1‑71 (MQ=255) cGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:306056/70‑1 (MQ=255) cGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:775983/70‑1 (MQ=255) cGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:105726/70‑1 (MQ=255) gTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtctc > 1:2759234/1‑52 (MQ=255) gTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtctc > 1:712925/1‑52 (MQ=255) gTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtctc > 1:3673244/1‑52 (MQ=255) gTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTg < 1:71603/71‑1 (MQ=255) tGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTg > 1:1687651/1‑70 (MQ=255) gCTACGAACAGAAAGATCCGAAGCAGGAATACAAACGTg > 1:820422/1‑39 (MQ=255) tACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTc > 1:2730860/1‑71 (MQ=255) cGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGt > 1:286683/1‑71 (MQ=255) gCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGtt < 1:375450/41‑1 (MQ=255) gCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGtt < 1:439253/41‑1 (MQ=255) gCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGtt < 1:1193769/41‑1 (MQ=255) gCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtc < 1:278394/42‑1 (MQ=255) gCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtc < 1:3017512/42‑1 (MQ=255) cacaGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtc < 1:1558501/41‑1 (MQ=255) acaGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtct > 1:2374123/1‑41 (MQ=255) acaGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtct > 1:266744/1‑41 (MQ=255) acaGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTtct > 1:192702/1‑41 (MQ=255) acaGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTg > 1:3590701/1‑70 (MQ=255) acaGAAAGATCAGAAGCAGGAATAGAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTGGt < 1:1976049/68‑1 (MQ=255) caGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGa > 1:2735998/1‑70 (MQ=255) gAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgttt < 1:1139643‑M2/46‑5 (MQ=255) gAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgttt < 1:2316722‑M2/46‑5 (MQ=255) aGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATg < 1:1195160/71‑1 (MQ=255) gATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATg > 1:3305895/1‑70 (MQ=255) tCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAg < 1:2098347/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:1071692/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:1291248/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:2845415/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:2437857/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:1880430/71‑1 (MQ=255) aaGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:2667306/46‑1 (MQ=255) aaGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTAt < 1:384266/71‑1 (MQ=255) aaGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTAt < 1:51735/71‑1 (MQ=255) aGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATc < 1:1498429/71‑1 (MQ=255) cAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg < 1:1009822/71‑1 (MQ=255) gAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTAc < 1:1367090/71‑1 (MQ=255) gAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTAc < 1:636986/71‑1 (MQ=255) gAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTAc < 1:36527/71‑1 (MQ=255) aaTACAAACGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtg < 1:311253‑M2/71‑47 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGa < 1:2487661/49‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGa < 1:1961312/49‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg < 1:653442/65‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg < 1:2247915/65‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCt < 1:3501431/71‑1 (MQ=255) cAAACatggagaacgattcacgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtggata < 1:2381172‑M1/71‑67 (MQ=255) cAAACatggagaacgattcacgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtgga < 1:3588204‑M1/69‑65 (MQ=255) cAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTg < 1:347105/70‑1 (MQ=255) aaaCatggagaacgattcacgtttgtattcctgcttcggatctttc < 1:3519460‑M1/46‑43 (MQ=255) aaaCatggagaacgattcacgtttgtattcctgcttcggatctttc < 1:1139643‑M1/46‑43 (MQ=255) aaaCatggagaacgattcacgtttgtattcctgcttcggatctttc < 1:2316722‑M1/46‑43 (MQ=255) aaaCatggagaacgattcacgtttgtattcctgcttcggatct > 1:2368573‑M1/1‑4 (MQ=255) aaaCatggagaaagattcacgtttgtattcctgcttcggatct > 1:717538‑M1/1‑4 (MQ=255) aaaCGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtggatac < 1:287459‑M2/71‑52 (MQ=255) aaaCGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtg > 1:249873‑M2/1‑20 (MQ=255) aaaCGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtg > 1:1465750‑M2/1‑20 (MQ=255) aCGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAatat > 1:3000019/1‑49 (MQ=255) aCGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGc > 1:1565810/1‑70 (MQ=255) catggagaacgattcacgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtggataccct < 1:1950244‑M1/71‑71 (MQ=255) catggagaacgattcacgtttgtattcctgcttcggatctttctgtgcgtagccacgc > 1:2451327‑M1/1‑1 (MQ=255) catggagaacgattcacgtttgtattcctgcttcggatctttctgtgcgtagccacgc > 1:3607458‑M1/1‑1 (MQ=255) catggagaacgattcacgtttgtattcctgcttcggatctttctgtgcgtagccacgc > 1:1278318‑M1/1‑1 (MQ=255) catggagaacgattcacgtttgtattcctgcttcggatctttctgtgcgtagccacgc > 1:899463‑M1/1‑1 (MQ=255) | GATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAA > Exported/95361‑95501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |