| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 212436 = | 61 (1.030) | 6 (0.110) | 3/94 | NT | 10.4% | coding (344/1359 nt) | mltD | predicted membrane‑bound lytic murein transglycosylase D |
| ? | Exported | 212461 = | 47 (0.860) | coding (319/1359 nt) | mltD | predicted membrane‑bound lytic murein transglycosylase D | |||||
GGCATTGGCGCCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCG > Exported/212366‑212504 | tatttacgcaataagagctatctccacgatgtaactttacgggcagagccgtatatgtactggatagcagg > 1:736452‑M1/71‑71 (MQ=255) cATTGGCGCCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGc < 1:1979419/71‑1 (MQ=255) cATTGGCGCCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGc < 1:2033141/71‑1 (MQ=255) tacgcaataagagctatctccacgatgtaactttacgggcagagccgtatatgtactggatagcagGGCa > 1:2886855‑M1/67‑70 (MQ=255) tacgcaataagagctatctccacgatgtaactttacgggcagagccgtatatgtactggatagcagGGCa > 1:3337470‑M1/67‑70 (MQ=255) tGGCGCCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCa < 1:1098247/69‑1 (MQ=255) tGGCGCCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCa < 1:1262607/69‑1 (MQ=255) tGGCGCCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCa < 1:2177232/69‑1 (MQ=255) acgcaataagagctatctccacgatgtaactttacgggcagagccgtatatgtactggatagcagGGCa > 1:1466614‑M1/66‑69 (MQ=255) gcgcCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATg > 1:2235762/1‑69 (MQ=255) gcgcCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATg > 1:2571853/1‑69 (MQ=255) gcgcCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGt < 1:504304/70‑1 (MQ=255) gcgcCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGt < 1:3318918/70‑1 (MQ=255) cAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGc > 1:589835/1‑62 (MQ=255) aGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGtt < 1:2089835/71‑1 (MQ=255) aCGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGtttt < 1:72108/71‑1 (MQ=255) ttGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTa < 1:3031117/71‑1 (MQ=255) tGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTaa > 1:140180/1‑71 (MQ=255) tGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTa > 1:2825909/1‑70 (MQ=255) gCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTaa < 1:3677787/70‑1 (MQ=255) cGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACt < 1:911030/71‑1 (MQ=255) tGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTg < 1:877509/71‑1 (MQ=255) tGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTg < 1:2421302/71‑1 (MQ=255) tGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTg < 1:2464495/71‑1 (MQ=255) gAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGtttttt > 1:3185484/1‑64 (MQ=255) cacgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTg > 1:845756‑M1/47‑69 (MQ=255) cacgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTg > 1:2066741‑M1/47‑69 (MQ=255) cacgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTg > 1:834647‑M1/47‑69 (MQ=255) cacgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTGcc > 1:38559‑M1/47‑71 (MQ=255) aGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGcc > 1:2052622/1‑71 (MQ=255) acgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTGccc > 1:2011219‑M1/46‑71 (MQ=255) acgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTGccc > 1:168356‑M1/46‑71 (MQ=255) gATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGccc < 1:2216921/70‑1 (MQ=255) cAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTaa > 1:744687/1‑60 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAgg > 1:2252455/1‑42 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAgg > 1:2030096/1‑42 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAgg > 1:131729/1‑42 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAgg > 1:2794767/1‑42 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCt < 1:2400225/70‑1 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCt < 1:773936/70‑1 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTa < 1:1637956/71‑1 (MQ=255) aaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATc > 1:2087331/1‑71 (MQ=255) aaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATc > 1:2441666/1‑71 (MQ=255) aGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATcc < 1:771929/71‑1 (MQ=255) tttacgggcagagccgtatatgtactggatagcaggg < 1:554417‑M1/2‑1 (MQ=255) gcTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGt < 1:2862442/71‑1 (MQ=255) ctctCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGttt > 1:2141807/1‑47 (MQ=255) tctcCACTATGGGTATTAGTACCAGTTCCATAGGCATGTTACGtttt < 1:2705404/47‑1 (MQ=255) tctcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAAc > 1:1830881/1‑52 (MQ=255) tctcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACt < 1:1424588/53‑1 (MQ=255) tctcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACt < 1:1018943/53‑1 (MQ=255) tctcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACt < 1:701859/53‑1 (MQ=255) tctcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACt < 1:2494515/53‑1 (MQ=255) tcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTg > 1:2828433/1‑53 (MQ=255) tcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTg > 1:1402947/1‑53 (MQ=255) tcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACa > 1:766358/1‑70 (MQ=255) tcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACa > 1:2555883/1‑70 (MQ=255) ccACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata > 1:302289/1‑71 (MQ=255) ccACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata > 1:3048599/1‑71 (MQ=255) ccACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACat > 1:1142694/1‑70 (MQ=255) cACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACatat < 1:1152229/71‑1 (MQ=255) cACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata > 1:2768791/1‑70 (MQ=255) aCTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACAtata > 1:3160101/1‑71 (MQ=255) cTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATAc > 1:961197/1‑71 (MQ=255) aTGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTg > 1:542796/1‑47 (MQ=255) tGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGc < 1:829071/71‑1 (MQ=255) agtagtaCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGc > 1:1962406/1‑71 (MQ=255) agtaCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCg > 1:2344213/1‑71 (MQ=255) taCCAGTTCCATAGGGATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata < 1:1605167/55‑1 (MQ=255) taCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATc < 1:75559/46‑1 (MQ=255) taCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata < 1:913775/55‑1 (MQ=255) taCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata < 1:3606706/55‑1 (MQ=255) aCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTg > 1:2814047/1‑64 (MQ=255) ccAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACAtata > 1:1883472/1‑55 (MQ=255) ccAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACAtata > 1:2221408/1‑55 (MQ=255) ccAGTTCCATAGGCATGTTACGTTTTTTAACTTGCACTGCTATCCAGTACatat > 1:81431/1‑54 (MQ=255) aGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGt > 1:2356420/1‑71 (MQ=255) gTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGccc > 1:2586210/1‑63 (MQ=255) gTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGccc > 1:1646312/1‑63 (MQ=255) ttCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACgg < 1:1055790/54‑1 (MQ=255) tCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTa > 1:3359454/1‑64 (MQ=255) tCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATACAGTACATATACGGctc > 1:428284/1‑56 (MQ=255) cATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACa < 1:239695/70‑1 (MQ=255) cATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACAt > 1:3735485/1‑71 (MQ=255) tAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCg > 1:3044654/1‑71 (MQ=255) tAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCg < 1:2355812/71‑1 (MQ=255) tAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCg < 1:2260136/71‑1 (MQ=255) GGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTa < 1:875091‑M1/64‑1 (MQ=255) | GGCATTGGCGCCAGACGTTGCGTGAGGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCG > Exported/212366‑212504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |