| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 723645 | 82 (1.390) | 5 (0.090) | 3/94 | NT | 6.1% | intergenic (‑23/‑112) | rne/yceQ | fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome/hypothetical protein |
| ? | Exported | = 723669 | 79 (1.450) | intergenic (‑47/‑88) | rne/yceQ | fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome/hypothetical protein | |||||
Only 100 of 113 total aligned reads displayed.
GCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGC > Exported/723578‑723714 | gcgcAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACAtt < 1:2206811/71‑1 (MQ=255) cgcAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACAtt > 1:871165/1‑70 (MQ=255) cgcAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACAtt < 1:2296802/70‑1 (MQ=255) cAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTgac < 1:880065/71‑1 (MQ=255) cAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTgac < 1:1206622/71‑1 (MQ=255) cAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTgac < 1:909186/71‑1 (MQ=255) aCTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTgacga > 1:2482574/1‑71 (MQ=255) aCTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTgacga > 1:2457894/1‑71 (MQ=255) aCTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTgacga > 1:3113903/1‑71 (MQ=255) ctTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACa > 1:837705/1‑61 (MQ=255) ttCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACt < 1:1400709/69‑1 (MQ=255) ttCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACt < 1:1142657/69‑1 (MQ=255) ttCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACt < 1:1505519/69‑1 (MQ=255) ttCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACt < 1:2855861/69‑1 (MQ=255) ccTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTa < 1:1486549/68‑1 (MQ=255) ccTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTa < 1:30695/68‑1 (MQ=255) ccTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTa < 1:1999406/68‑1 (MQ=255) tgctgAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTg > 1:1868075/1‑71 (MQ=255) tgctgAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTg > 1:1872629/1‑71 (MQ=255) ctgAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTg < 1:2106619/69‑1 (MQ=255) ctgAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCg > 1:2353786/1‑71 (MQ=255) tgAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTg < 1:2645116/68‑1 (MQ=255) aGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGc < 1:534196/71‑1 (MQ=255) aGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGc < 1:1194351/71‑1 (MQ=255) aGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGc < 1:3601311/71‑1 (MQ=255) gTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGc > 1:2067929/1‑70 (MQ=255) gTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGc > 1:1836346/1‑70 (MQ=255) gTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCa < 1:883613/71‑1 (MQ=255) ttGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCaa < 1:2786107/71‑1 (MQ=255) cGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACtttgcccgcagcttagtcgtcaatg < 1:3480870‑M1/70‑26 (MQ=255) gTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACtttgcccgcagcttagtcgtcaatgt < 1:1041160‑M1/70‑27 (MQ=255) gATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAAc < 1:1881740/70‑1 (MQ=255) gATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAAc < 1:1298421/70‑1 (MQ=255) gATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACg > 1:1242590/1‑71 (MQ=255) aTTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGc > 1:239219/1‑71 (MQ=255) tAACATTCTTTTCATCGTAACTTACTCATTATTCTTACtttgcccgcagcttagtcgtcaa > 1:3713554‑M1/1‑38 (MQ=255) tAACATTCTTTTCATCGTAACTTACTCATTATTCTTACtttgcccgcagcttagtcgtcaa > 1:654543‑M1/1‑38 (MQ=255) tAACATTCTTTTCATCGTAACTTACTCATTATTCTTACtttgcccgcagcttagtcgtcaa > 1:2563164‑M1/1‑38 (MQ=255) aCATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCttt > 1:558352/1‑71 (MQ=255) cATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTc < 1:2211826/71‑1 (MQ=255) ttCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTg < 1:3554102/49‑1 (MQ=255) ttCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTg > 1:2037310/1‑49 (MQ=255) ttCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCg > 1:1904565/1‑71 (MQ=255) ttCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTATCCg > 1:166722/1‑71 (MQ=255) tCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAgt > 1:542052‑M2/1‑56 (MQ=255) cTTTTCATCGTAACTTACTCATTATTCTTACATTgac < 1:1795805/37‑1 (MQ=255) cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCgg < 1:2986854/70‑1 (MQ=255) cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCgg < 1:2257983/70‑1 (MQ=255) cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAAAGCCTTTCCgg < 1:2097159/70‑1 (MQ=255) ttttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAgtaa < 1:2742170‑M2/58‑5 (MQ=255) ttttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAgtaa < 1:3663952‑M2/58‑5 (MQ=255) tttCATCGTAACTTACTCATTATTCTTACATTgacga > 1:2621254/1‑37 (MQ=255) tttCATCGTAACTTACTCATTATTCTTACATTgacga > 1:334288/1‑37 (MQ=255) ttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCggg < 1:878158/68‑1 (MQ=255) tCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgtgt < 1:586254/70‑1 (MQ=255) cATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTTCGGGCAAAgt > 1:2970995‑M2/1‑50 (MQ=255) cATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGtgtg < 1:1739372/70‑1 (MQ=255) cATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGtgtg < 1:3658913/70‑1 (MQ=255) tCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAc > 1:2563427/1‑71 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgt > 1:3312923/1‑63 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc > 1:579577/1‑70 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc > 1:641406/1‑70 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc > 1:2256628/1‑70 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:3718314/71‑1 (MQ=255) tAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa < 1:2865852/71‑1 (MQ=255) aCTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGAt < 1:3091915/70‑1 (MQ=255) cTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGAt < 1:3140049/69‑1 (MQ=255) ttACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATg < 1:2851167/69‑1 (MQ=255) ttACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATg < 1:1114966/69‑1 (MQ=255) ttACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATg < 1:2280505/69‑1 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:1340210/1‑66 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:2100508/1‑66 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:3211687/1‑66 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:148975/1‑66 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGcc > 1:1801815/1‑47 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg > 1:321288/1‑64 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg > 1:1293137/1‑64 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATTGcc < 1:3199042/70‑1 (MQ=255) tCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCg > 1:3616514/1‑71 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:2679907/60‑1 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:2967458/60‑1 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:2271469/60‑1 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCgtg > 1:757991/1‑71 (MQ=255) ttattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:1771130/59‑1 (MQ=255) tCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCggg < 1:3118244/46‑1 (MQ=255) tCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCggg < 1:2658456/46‑1 (MQ=255) cTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgt > 1:3414107/1‑71 (MQ=255) ttACtttgcccgcagcttagtcgtcaatgtaagaataatgagtaagttacgatgaaaa < 1:3663952‑M1/58‑55 (MQ=255) ttACtttgcccgcagcttagtcgtcaatgtaagaataatgagtaagttacgatgaaaa < 1:2742170‑M1/58‑55 (MQ=255) ttACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc < 1:2168640/52‑1 (MQ=255) ttACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc < 1:2517090/52‑1 (MQ=255) tACtttgcccgcagcttagtcgtcaatgtaagaataatgagtaagttacgatgaaaagaatgttaatcaa > 1:417750‑M1/1‑3 (MQ=255) aCtttgcccgcagcttagtcgtcaatgtaagaataatgagtaagttacgatgaaaaga > 1:542052‑M1/1‑2 (MQ=255) aCtttgcccgaagcttagtcgtcaatgtaagaataatgagtaagttacgatg > 1:2970995‑M1/1‑2 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAgtaagaataatgagtaagttacgatgaaaagaatgttaatcaac < 1:1041160‑M2/70‑45 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgtgt > 1:3360222/1‑45 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgc > 1:1211677/1‑71 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtc < 1:242953/69‑1 (MQ=255) cATTGACGACTAAGCTGCGGGCAACGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgc < 1:3541863/70‑1 (MQ=255) cATTGACGACTAAGCTGCGGGCAAAgtaagaataatgagtaagttacgatgaaaagaatgttaatcaacg < 1:3480870‑M2/70‑46 (MQ=255) | GCGCAACTCTTCCTGCTGAGTTGCGTTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGC > Exported/723578‑723714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |