| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 882505 = | 35 (0.590) | 4 (0.090) | 3/78 | NT | 14.3% | intergenic (‑223/+46) | osmB/yciT | lipoprotein/predicted DNA‑binding transcriptional regulator |
| ? | Exported | 882535 = | 21 (0.470) | intergenic (‑253/+16) | osmB/yciT | lipoprotein/predicted DNA‑binding transcriptional regulator | |||||
TAATTTTATATCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGT > Exported/882435‑882574 | gatctgatgcatcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctac < 1:289685‑M1/1‑1 (MQ=255)gatctgatgcatcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctac < 1:2330764‑M1/1‑1 (MQ=255)gatctgatgcatcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctac < 1:1998710‑M1/1‑1 (MQ=255) atTTTATATCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCgg < 1:697245/71‑1 (MQ=255) atTTTATATCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCgg < 1:3003196/71‑1 (MQ=255) atgcatcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCg < 1:295193‑M1/2‑1 (MQ=255) atgcatcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGgatga < 1:229553‑M1/7‑1 (MQ=255) tgcatcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGgatgat < 1:1054689‑M1/8‑1 (MQ=255) tatCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGgatgat < 1:2787169/70‑1 (MQ=255) catcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGGATGAtt > 1:2956489‑M1/62‑70 (MQ=255) catcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGGATGAtt > 1:3565086‑M1/62‑70 (MQ=255) atCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCg > 1:98818/1‑63 (MQ=255) atCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCg > 1:3391969/1‑63 (MQ=255) atCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCg > 1:918424/1‑63 (MQ=255) atcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGGATGATTTg < 1:1178834‑M1/11‑1 (MQ=255) atcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGGATGATTTg < 1:1860643‑M1/11‑1 (MQ=255) atcttgagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGGATGATTTg > 1:1450030‑M1/61‑71 (MQ=255) tcttgagcacattaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGGATGAttt > 1:2120126‑M1/60‑69 (MQ=255) tGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTg > 1:1620984/1‑68 (MQ=255) tGAGAGAGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTg > 1:3570600/1‑68 (MQ=255) gagcacagtaaactcaccattcacgtcgttgacatttaaccatttcccttctctaCGGATGATTTGc > 1:1906381‑M1/56‑67 (MQ=255) gagTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAAc > 1:3323208/1‑71 (MQ=255) ttAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACt > 1:1849988/1‑67 (MQ=255) ttAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCaa < 1:3450101/71‑1 (MQ=255) ttAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCa < 1:3162601/70‑1 (MQ=255) ttAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCa > 1:980251/1‑70 (MQ=255) taataaCAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCaaa > 1:858771/1‑71 (MQ=255) aataaCAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAat > 1:1382199/1‑71 (MQ=255) ataaCAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAat > 1:574678/1‑70 (MQ=255) taaCAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTg > 1:620585/1‑56 (MQ=255) taaCAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAatca > 1:3347302/1‑71 (MQ=255) aaCAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAatcat > 1:3094755/1‑71 (MQ=255) aGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCaaa < 1:603507/64‑1 (MQ=255) ggTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCg < 1:1830945/70‑1 (MQ=255) ttcacgtcgttgacatttaaccatttcccttctctaCGGATGATTTGCCAAACTGCAAatca < 1:2050853‑M1/26‑1 (MQ=255) aTAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAgaga < 1:1007482/71‑1 (MQ=255) tAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCaa > 1:47011/1‑56 (MQ=255) tAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCaa > 1:1088393/1‑56 (MQ=255) gTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAgg > 1:320087/1‑71 (MQ=255) tAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGaaa > 1:2645836/1‑71 (MQ=255) tAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGaaa > 1:3433845/1‑71 (MQ=255) aaTTATCAACCAGGAATCATCTTAGAGCGGATGAttt > 1:1300592/1‑37 (MQ=255) aTTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAAt < 1:1991598/70‑1 (MQ=255) aTCAACCAGGACTCATCTTAGAGCGGATGATTTGCCaa < 1:1896879/38‑1 (MQ=255) aTCAACCAGGAATCGTCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGt < 1:565079/70‑1 (MQ=255) aTCAACCAGGAATCATCTTAGAGCGGATGATTTGCCaa < 1:3396571/38‑1 (MQ=255) aTCAACCAGGAATCATCTTAGAGCGGATGATTTGCCaa < 1:853498/38‑1 (MQ=255) aTCAACCAGGAATCATCTTAGAGCGGATGATTTGCCaa < 1:2886906/38‑1 (MQ=255) aTCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACt < 1:1473684/41‑1 (MQ=255) aTCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATcc > 1:1561644/1‑52 (MQ=255) aaCCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTaaa > 1:253999/1‑71 (MQ=255) ccAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATg < 1:3485810/71‑1 (MQ=255) ccAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATg > 1:3327141/1‑71 (MQ=255) ccAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATg > 1:2428471/1‑71 (MQ=255) ccatttcccttctctaCGGATGATTTGCCAAACTGCa > 1:587694‑M1/17‑37 (MQ=255) ccatttcccttctctaCGGATGATTTGCCAAACTGCa > 1:1255424‑M1/17‑37 (MQ=255) atttcccttctctaCGGATGATTTGCCAAACTGCaaa < 1:3635802‑M1/23‑1 (MQ=255) tAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:1337993/1‑71 (MQ=255) tAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:3351748/1‑71 (MQ=255) tAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:2541018/1‑71 (MQ=255) agagCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGa < 1:763540/69‑1 (MQ=255) agagCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGa < 1:1497566/69‑1 (MQ=255) gagCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATg < 1:740247/71‑1 (MQ=255) agCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATgg > 1:3155802/1‑71 (MQ=255) gCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2289611/71‑1 (MQ=255) gCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2293988/71‑1 (MQ=255) gCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2606994/71‑1 (MQ=255) | TAATTTTATATCTTGAGAGTGTTAATAACAGGTAAATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGT > Exported/882435‑882574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |