| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1094415 | 42 (0.710) | 6 (0.110) | 4/94 | NT | 12.5% | coding (1962/3057 nt) | ydiJ | predicted FAD‑linked oxidoreductase |
| ? | Exported | = 1094431 | 45 (0.830) | coding (1946/3057 nt) | ydiJ | predicted FAD‑linked oxidoreductase | |||||
Only 100 of 104 total aligned reads displayed.
CTTTACAGGCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAGTTCTTGTTCCA > Exported/1094345‑1094485 | cTTTACAGGCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCA > 1:2502071‑M1/1‑71 (MQ=255) ttACAGGCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATg > 1:878919/1‑71 (MQ=255) tACAGGCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCAt < 1:597393/69‑1 (MQ=255) tACAGGCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGc > 1:3371401/1‑71 (MQ=255) aCAGGCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGc < 1:476776/70‑1 (MQ=255) gCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTGATATTCGCCTTTATTCGCATGCCAGc > 1:3367800/1‑70 (MQ=255) gCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGc > 1:3183918/1‑70 (MQ=255) ccAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTa < 1:3731394/71‑1 (MQ=255) cAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTAt > 1:2733998/1‑71 (MQ=255) aGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGc < 1:1180334/67‑1 (MQ=255) gACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTg > 1:2222884/1‑71 (MQ=255) aCAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTgc < 1:2994221/71‑1 (MQ=255) gCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGcgcg < 1:842921/71‑1 (MQ=255) gCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGcgcg < 1:478697/71‑1 (MQ=255) cccGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGt > 1:1211555‑M2/1‑70 (MQ=255) cGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCAcgcgcaatagctggcatgc < 1:379249‑M1/71‑20 (MQ=255) cGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCAcgcgcaatagctggcatgc < 1:3443979‑M1/71‑20 (MQ=255) cGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCAcgcgcaatagctggcatgc > 1:344909‑M1/1‑52 (MQ=255) cGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgc > 1:1581386‑M2/1‑68 (MQ=255) cGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgc > 1:3119580‑M2/1‑68 (MQ=255) gACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgcg > 1:3125045‑M2/1‑67 (MQ=255) gACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgcg < 1:1981963‑M2/71‑5 (MQ=255) gCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCAcgcgcaatagctggcatgcgaataaa < 1:921074‑M1/71‑27 (MQ=255) gCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCaa < 1:2348359/70‑1 (MQ=255) gCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCCCGCACGCGCaa < 1:420293/70‑1 (MQ=255) ccTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAAt > 1:3537476/1‑70 (MQ=255) ccTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAAt > 1:2349948/1‑70 (MQ=255) tctTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTAtt < 1:305321/53‑1 (MQ=255) tctTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTaa > 1:756085/1‑71 (MQ=255) tctTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTaa > 1:1621354/1‑71 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCa > 1:2901490/1‑43 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCa > 1:1398025/1‑43 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCa > 1:722727/1‑43 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCa > 1:1426185/1‑43 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGt > 1:605456‑M2/1‑54 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGt > 1:2565798‑M2/1‑54 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGt > 1:2045418‑M2/1‑54 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTc > 1:1066578/1‑71 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTc > 1:1379698/1‑71 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTc > 1:1377746/1‑71 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTc > 1:1204975/1‑71 (MQ=255) tGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTc > 1:200851/1‑71 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGGCAGCTATTGCGCGtgc < 1:498957‑M2/55‑4 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgc < 1:442134‑M2/55‑4 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgc < 1:62303‑M2/55‑4 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgc < 1:1783304‑M2/55‑4 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtgc < 1:593583‑M2/55‑4 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTcc < 1:2874249/70‑1 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTcc < 1:2240370/70‑1 (MQ=255) aCTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCg > 1:3549705/1‑71 (MQ=255) ttCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGc > 1:2700924/1‑70 (MQ=255) tCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTa < 1:3283666/61‑1 (MQ=255) tCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTa < 1:251431/61‑1 (MQ=255) cGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtg < 1:3431711‑M2/50‑3 (MQ=255) cGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGtg < 1:803565‑M2/50‑3 (MQ=255) cGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCa < 1:3319389/69‑1 (MQ=255) gtgtGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTa > 1:1534182/1‑40 (MQ=255) gtgAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCggg > 1:759529/1‑51 (MQ=255) agaAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACg > 1:2709194/1‑71 (MQ=255) aaGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGcc < 1:2172412/71‑1 (MQ=255) aaGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGcc < 1:2030767/71‑1 (MQ=255) aaGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGc < 1:2790036/70‑1 (MQ=255) gTCATATTCGCCTTTATTCGCAcgcgcaatagctggc < 1:3155760‑M1/37‑16 (MQ=255) gTCATATTCGCCTTTATTCGCAcgcgcaatagctggc < 1:1923417‑M1/37‑16 (MQ=255) tCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGcctg > 1:749929/1‑68 (MQ=255) tCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGa < 1:2987193/71‑1 (MQ=255) tCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGa < 1:170892/71‑1 (MQ=255) atatTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGAtt > 1:1250330/1‑71 (MQ=255) tatTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTc < 1:2139208/71‑1 (MQ=255) atTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGc > 1:3263837/1‑40 (MQ=255) ttCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCa < 1:1642470/70‑1 (MQ=255) tttATTCGCATGCCAGCTATTGCGCGtgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggc < 1:921074‑M2/71‑46 (MQ=255) ttATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAGTTc > 1:1593191/1‑71 (MQ=255) cGCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtc < 1:1981963‑M1/71‑68 (MQ=255) cGCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtc > 1:3125045‑M1/1‑4 (MQ=255) cGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTc < 1:3390373/37‑1 (MQ=255) cGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAg > 1:581273/1‑63 (MQ=255) cGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAGTTCTTGt < 1:1562206/70‑1 (MQ=255) cGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAGTTCTTGt < 1:3591356/70‑1 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtcg < 1:3086233‑M1/71‑69 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtcg > 1:1581386‑M1/1‑3 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtcg > 1:3119580‑M1/1‑3 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagt < 1:62303‑M1/55‑53 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagt < 1:593583‑M1/55‑53 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagt < 1:442134‑M1/55‑53 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagt < 1:1783304‑M1/55‑53 (MQ=255) gCAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagt < 1:411353‑M1/55‑53 (MQ=255) gCAcgcgcaatagctgccatgcgaataaaggcgaatatgacttctcacacgaagt < 1:498957‑M1/55‑53 (MQ=255) gCATGCCAGCTATTGCGCGtgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtcg < 1:379249‑M2/71‑53 (MQ=255) gCATGCCAGCTATTGCGCGtgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtcg < 1:3443979‑M2/71‑53 (MQ=255) gCATGCCAGCTATTGCGCGtgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtcg > 1:344909‑M2/1‑19 (MQ=255) cAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacg < 1:3431711‑M1/50‑49 (MQ=255) cAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacg < 1:2029758‑M1/50‑49 (MQ=255) cAcgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacg < 1:803565‑M1/50‑49 (MQ=255) acgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtcaaagaggcgatgtcggg > 1:1211555‑M1/1‑1 (MQ=255) acgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtca > 1:2045418‑M1/1‑1 (MQ=255) acgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtca > 1:2565798‑M1/1‑1 (MQ=255) acgcgcaatagctggcatgcgaataaaggcgaatatgacttctcacacgaagtca > 1:605456‑M1/1‑1 (MQ=255) aTGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAGTTCTTGTTCCa < 1:2500112/71‑1 (MQ=255) aTGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAGTTCTTGTTCCa < 1:2531078/71‑1 (MQ=255) | CTTTACAGGCCAGACAGCCCGACATCGCCTCTTTGACTTCGTGTGAGAAGTCATATTCGCCTTTATTCGCATGCCAGCTATTGCGCGTGCGGGCAATTAACGTCCGCAAACTGACGCCGGATTCAGGCAGTTCTTGTTCCA > Exported/1094345‑1094485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |