| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1213192 | 48 (0.810) | 3 (0.060) | 3/80 | NT | 6.0% | intergenic (+112/+32) | yobH/kdgR | hypothetical protein/predicted DNA‑binding transcriptional regulator |
| ? | Exported | = 1213205 | 56 (1.210) | intergenic (+125/+19) | yobH/kdgR | hypothetical protein/predicted DNA‑binding transcriptional regulator | |||||
TTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAAT > Exported/1213123‑1213262 | ttATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACctgtct > 1:837061/1‑71 (MQ=255) taGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACctgtctgt < 1:1550070/70‑1 (MQ=255) gcgcGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGatat > 1:3233132/1‑71 (MQ=255) cgcgTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACctgtctgt < 1:2068216/63‑1 (MQ=255) cgcgTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATAtt > 1:2644121/1‑71 (MQ=255) gTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCg > 1:1532143‑M2/1‑70 (MQ=255) tttAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCga > 1:3627323‑M2/1‑69 (MQ=255) tttAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCga > 1:2914151‑M2/1‑69 (MQ=255) tttAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCga > 1:579758‑M2/1‑69 (MQ=255) tAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgac > 1:3268333‑M2/1‑67 (MQ=255) aaTATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCGgacag < 1:425702‑M2/71‑6 (MQ=255) aaTATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacag < 1:3652226‑M2/71‑6 (MQ=255) aaTATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgaca < 1:3100352‑M2/70‑5 (MQ=255) atatAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCggaatatcaaacagaca < 1:3323388‑M1/69‑18 (MQ=255) tataACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCggaatatcaaacagacaggt < 1:1486156‑M1/71‑21 (MQ=255) ataACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCggaatatcaaacagacagg > 1:2911635‑M1/1‑50 (MQ=255) ataACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggtt < 1:3539485‑M2/71‑9 (MQ=255) ataACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggt < 1:1659030‑M2/70‑8 (MQ=255) taACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggttc < 1:847101‑M2/71‑10 (MQ=255) aCGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggttct > 1:1741746‑M2/1‑60 (MQ=255) cACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTActc > 1:1265393/1‑71 (MQ=255) cACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTActc > 1:205915/1‑71 (MQ=255) aCCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTg < 1:2893325/48‑1 (MQ=255) aCCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCTACAGGTTCTTActct < 1:3383443/71‑1 (MQ=255) ccTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTActct > 1:1697103/1‑70 (MQ=255) ttCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTg < 1:2446019/45‑1 (MQ=255) ttCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTg < 1:900381/45‑1 (MQ=255) ttCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCtcat > 1:842307/1‑71 (MQ=255) ttCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCtca > 1:2587330/1‑70 (MQ=255) ttCAACTTTATTTTTCTAATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCtcat > 1:1954627/1‑71 (MQ=255) tttttCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGa < 1:1014892/70‑1 (MQ=255) ttttCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggtt < 1:2954662‑M2/49‑9 (MQ=255) tttCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATa < 1:2067073/70‑1 (MQ=255) tctcATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGt < 1:633646/70‑1 (MQ=255) ctcATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGTATAGt < 1:2090973/69‑1 (MQ=255) ctcATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGt < 1:2756945/69‑1 (MQ=255) ctcATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGt < 1:2396476/69‑1 (MQ=255) ctcATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTc < 1:1302802/70‑1 (MQ=255) aTGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAg > 1:1383852/1‑65 (MQ=255) tGCTAAATAAAGAACCTGTCTGTTTGATATTCCgac > 1:3642098‑M2/1‑33 (MQ=255) tGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGAt < 1:2697662/62‑1 (MQ=255) tGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGAt < 1:3415736/62‑1 (MQ=255) tGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGAt < 1:1235341/71‑1 (MQ=255) tGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGAt < 1:402951/71‑1 (MQ=255) cTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATaa > 1:2823220/1‑71 (MQ=255) cTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATa < 1:3071808/70‑1 (MQ=255) taaataaaGAACCTGTCTGTTTGATATTCCgacaggttc < 1:1583279‑M2/39‑10 (MQ=255) aaataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGt > 1:807997/1‑64 (MQ=255) aaataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGt > 1:2181601/1‑64 (MQ=255) aaataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAAcc > 1:3731407/1‑71 (MQ=255) aataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAAcc > 1:1639347/1‑70 (MQ=255) aataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAAcc > 1:3144622/1‑70 (MQ=255) ataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCa > 1:1651008/1‑71 (MQ=255) ataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCa > 1:1056792/1‑71 (MQ=255) taaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTc > 1:1770362/1‑59 (MQ=255) taaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAt < 1:192980/71‑1 (MQ=255) taaaGAACCTGTCTGTTTCATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGt > 1:2259395/1‑58 (MQ=255) aaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAttt < 1:3550918/71‑1 (MQ=255) aaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAttt < 1:3288502/71‑1 (MQ=255) aGAACCTGTCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgt > 1:1741746‑M1/1‑10 (MQ=255) aGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTg > 1:3675727/1‑71 (MQ=255) gAACCTGTCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgtta < 1:847101‑M1/71‑63 (MQ=255) gAACCTGTCggaatatcaaacagacaggttctttattta < 1:1583279‑M1/39‑31 (MQ=255) aaCCTGTCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttat < 1:3539485‑M1/71‑64 (MQ=255) aaCCTGTCggaatatcaaacagacaggttctttatttagcatgagaaaa < 1:2954662‑M1/49‑42 (MQ=255) aaCCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAAcc > 1:2470954/1‑63 (MQ=255) aaCCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAAcc > 1:3508614/1‑63 (MQ=255) aCCTGTCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttat < 1:1659030‑M1/70‑64 (MQ=255) aCCTGTCTGTTTGATATTCCgacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttata < 1:1486156‑M2/71‑52 (MQ=255) aCCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTggg < 1:401413/70‑1 (MQ=255) aCCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGc < 1:1015406/71‑1 (MQ=255) ccTGTCTGTTTGATATTCCgacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttat > 1:2911635‑M2/1‑19 (MQ=255) ccTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAtt > 1:3613564/1‑65 (MQ=255) ccTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTgg > 1:3648658/1‑68 (MQ=255) ccTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTgg > 1:1154514/1‑68 (MQ=255) ccTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTgg > 1:539490/1‑68 (MQ=255) ccTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTgg > 1:892774/1‑68 (MQ=255) cTGTCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatatt < 1:3652226‑M1/71‑67 (MQ=255) cTGTCcgaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatatt < 1:425702‑M1/71‑67 (MQ=255) tgtctgtTTGATATTCCgacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatat < 1:3323388‑M2/69‑53 (MQ=255) tGTCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatatt < 1:3100352‑M1/70‑67 (MQ=255) gtctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATa > 1:3619544/1‑46 (MQ=255) gtctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAt < 1:2338228/61‑1 (MQ=255) gtctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTg > 1:1964006/1‑64 (MQ=255) gtctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGa > 1:2310278/1‑70 (MQ=255) gTCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatatta > 1:3268333‑M1/1‑3 (MQ=255) gTCggaatatcaaacagacaggttctttatttagca > 1:3642098‑M1/1‑3 (MQ=255) tctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACg < 1:964579/41‑1 (MQ=255) tctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACg < 1:2307127/41‑1 (MQ=255) tctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACg < 1:26077/41‑1 (MQ=255) tCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatattaaa > 1:579758‑M1/1‑2 (MQ=255) tCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatattaaa > 1:2914151‑M1/1‑2 (MQ=255) tCggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatattaaa > 1:3627323‑M1/1‑2 (MQ=255) ctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAttt > 1:2123157/1‑61 (MQ=255) cggaatatcaaacagacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatattaaac > 1:1532143‑M1/1‑1 (MQ=255) | TTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAAT > Exported/1213123‑1213262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |